RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 GORASP1Q9BQQ3 440 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 SEC61A2Q9H9S3 476 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 IMPACTQ9P2X3 320 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 FBLN5Q9UBX5 448 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 TCFL5Q9UL49 500 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 PCDHA4Q9UN74 947 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 FRMD4BQ9Y2L6 1034 aa1.05□□□□□ -2.24
TRAJ53-201ENST00000390485 PRAMEF27A3QJZ7 478 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 MYADML2A6NDP7 307 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 F8W031 263 aaPredicted RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 PEX11BO96011 259 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 BMP6P22004 513 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 PCBP3P57721 371 aaKnown RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 ETF1P62495 437 aaKnown RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 FOXF2Q12947 444 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 NOM1Q5C9Z4 860 aaKnown RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 STRIP1Q5VSL9 837 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 LRFN4Q6PJG9 635 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 FIBCD1Q8N539 461 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 DAGLBQ8NCG7 672 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 FAM200AQ8TCP9 573 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 GRIN3AQ8TCU5 1115 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 TSPAN17Q96FV3 270 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 GNRHR2Q96P88 292 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 HDAC8Q9BY41 377 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 SYNPO2LQ9H987 977 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 PCDH18Q9HCL0 1135 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 TFIP11Q9UBB9 837 aaKnown RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 GPN3Q9UHW5 284 aaPredicted RBP1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 PACSIN3Q9UKS6 424 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 POLIQ9UNA4 740 aa1.04□□□□□ -2.24
TRAJ53-201ENST00000390485 DNAJC9-AS1A6NH13 148 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 B4GALT4O60513 344 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 PRMT3O60678 531 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 ZNF28P17035 718 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 ACO1P21399 889 aaKnown RBP1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 DNAJA1P31689 397 aaKnown RBP1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 USP5P45974 858 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 KRTAP10-8P60410 259 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 CLEC16AQ2KHT3 1053 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 HDGFL1Q5TGJ6 251 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 MBNL2Q5VZF2 373 aaKnown RBP1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 RUSC1-AS1Q66K80 236 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 MAMDC4Q6UXC1 1216 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 TTLL6Q8N841 843 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 WBP1Q96G27 269 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 YTHDC1Q96MU7 727 aaKnown RBP1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 JMJD8Q96S16 334 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 MKNK1Q9BUB5 465 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 R3HDMLQ9H3Y0 253 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 CBX8Q9HC52 389 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 ERVK13-1Q9NX77 482 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 CEP72Q9P209 647 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 ZNF580Q9UK33 172 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 LRP12Q9Y561 859 aa1.03□□□□□ -2.24
TRAJ53-201ENST00000390485 CNOT4O95628 575 aaKnown RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 C8BP07358 591 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 CYP2C8P10632 490 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 EIF1AXP47813 144 aaKnown RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 CLK3P49761 638 aaKnown RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 LCE1CQ5T751 118 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 LCE1BQ5T7P3 118 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 SLC6A19Q695T7 634 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 RD3Q7Z3Z2 195 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 ZNF655Q8N720 491 aaPredicted RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 PLPPR2Q96GM1 343 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 TCTN2Q96GX1 697 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 ARHGEF17Q96PE2 2063 aaPredicted RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 DPH2Q9BQC3 489 aaPredicted RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 VPS33BQ9H267 617 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 PRDM13Q9H4Q3 707 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 AURKAIP1Q9NWT8 199 aaPredicted RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 CXXC1Q9P0U4 656 aaPredicted RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 TJP2Q9UDY2 1190 aa1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 TESQ9UGI8 421 aaKnown RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 REXO2Q9Y3B8 237 aaKnown RBP1.02□□□□□ -2.25
TRAJ53-201ENST00000390485 NOTCH4Q99466 2003 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 COL11A2P13942 1736 aaPredicted RBP1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 ACIN1Q9UKV3 1341 aaKnown RBP1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 POM121CA8CG34 1229 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 FKTNO75072 461 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 CYP1A1P04798 512 aaPredicted RBP1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 GRK4P32298 578 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 NMIQ13287 307 aaPredicted RBP1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 USPL1Q5W0Q7 1092 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 USP48Q86UV5 1035 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 SRRM1Q8IYB3 904 aaKnown RBP1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 FUKQ8N0W3 1084 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 TMEM52Q8NDY8 209 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 TMEM87BQ96K49 555 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 SYT3Q9BQG1 590 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 TMEM168Q9H0V1 697 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 BCAS3Q9H6U6 928 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 VRTNQ9H8Y1 702 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 TRAK1Q9UPV9 953 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 COG6Q9Y2V7 657 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 SNCAIPQ9Y6H5 919 aa1.01□□□□□ -2.25
TRAJ53-201ENST00000390485 POLR2AP24928 1970 aaKnown RBP1□□□□□ -2.25
TRAJ53-201ENST00000390485 SSU72P8A0A1W2PR75 194 aa1□□□□□ -2.25
TRAJ53-201ENST00000390485 RAD17O75943 681 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms