RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 NEURL1BA8MQ27 555 aa10.46□□□□□ -0.73
SNX1-202ENST00000380285 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
SNX1-202ENST00000380285 USTQ9Y2C2 406 aa10.46□□□□□ -0.73
SNX1-202ENST00000380285 DAAM1Q9Y4D1 1078 aa10.46□□□□□ -0.73
SNX1-202ENST00000380285 TTC4O95801 387 aa10.46□□□□□ -0.73
SNX1-202ENST00000380285 BRDTQ58F21 947 aaPredicted RBP10.46□□□□□ -0.73
SNX1-202ENST00000380285 STAM2O75886 525 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 RABEP2Q9H5N1 569 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 TTC36A6NLP5 189 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 HSPD1P10809 573 aaKnown RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 ADCY2Q08462 1091 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 PDCD2Q16342 344 aaPredicted RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 OTUD7BQ6GQQ9 843 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 CTAGE3PQ8IX95 158 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 RNF34Q969K3 372 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 THAP9Q9H5L6 903 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 LCMT1Q9UIC8 334 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 PFDN1O60925 122 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 UBE3CQ15386 1083 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 TERF2Q15554 542 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 MAN2A1Q16706 1144 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 MRRFQ96E11 262 aaKnown RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 IPO11Q9UI26 975 aaKnown RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 PCDHA12Q9UN75 941 aa10.46□□□□□ -0.74
SNX1-202ENST00000380285 NSFL1CQ9UNZ2 370 aaKnown RBP10.46□□□□□ -0.74
SNX1-202ENST00000380285 GAP43P17677 238 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 EXOC3L4Q17RC7 722 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 PRPF6O94906 941 aaKnown RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 CLCN6P51797 869 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 PSMD2Q13200 908 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 TMED8Q6PL24 325 aaPredicted RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 HELBQ8NG08 1087 aaPredicted RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 F8W031 263 aaPredicted RBP10.45□□□□□ -0.74
SNX1-202ENST00000380285 CIAO1O76071 339 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 CASP14P31944 242 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 KRT81Q14533 505 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 NRBF2Q96F24 287 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 AATKQ6ZMQ8 1374 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 BAG2O95816 211 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 CCDC188H7C350 402 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 TTI1O43156 1089 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 GAS7O60861 476 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 INHBAP08476 426 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 ZBED6P86452 979 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 CHRNA2Q15822 529 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 TTLL7Q6ZT98 887 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 MAP7D3Q8IWC1 876 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 HACE1Q8IYU2 909 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 LRGUKQ96M69 825 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 GDAP1L1Q96MZ0 367 aa10.45□□□□□ -0.74
SNX1-202ENST00000380285 IPO5O00410 1097 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 MAP3K7O43318 606 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CHMP2AO43633 222 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 PNMA6AP0CW24 399 aaPredicted RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 NR1D1P20393 614 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 SERPINB6P35237 376 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 PDE1CQ14123 709 aaPredicted RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 CACTINQ8WUQ7 758 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 KLHL29Q96CT2 875 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 USP44Q9H0E7 712 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 KIF1CO43896 1103 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 DCTN3O75935 186 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 HEXIM1O94992 359 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 KPNA2P52292 529 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 SCRN1Q12765 414 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 NR1H3Q13133 447 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CASP8Q14790 479 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 TAF12Q16514 161 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 VGLL3A8MV65 326 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CHUKO15111 745 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 FOSP01100 380 aaPredicted RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 GCFC2P16383 781 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 MID2Q9UJV3 735 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 GGA1Q9UJY5 639 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 ATP7BP35670 1465 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 POLR2FP61218 127 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 FAM89AQ96GI7 184 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 SERPINI1Q99574 410 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 PARD6BQ9BYG5 372 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 NOP53Q9NZM5 478 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 BAG5Q9UL15 447 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 BFSP1Q12934 665 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 ADAM9Q13443 819 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 ARHGAP44Q17R89 818 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 AZI2Q9H6S1 392 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CTNND1O60716 968 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms