RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 GUCD1Q96NT3 240 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 INCENPQ9NQS7 918 aa16.14■□□□□ 0.17
PRPF18-202ENST00000378572 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
PRPF18-202ENST00000378572 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
PRPF18-202ENST00000378572 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
PRPF18-202ENST00000378572 RASGRP2Q7LDG7 609 aa16.13■□□□□ 0.17
PRPF18-202ENST00000378572 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
PRPF18-202ENST00000378572 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
PRPF18-202ENST00000378572 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 KIAA0355O15063 1070 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 ASGR1P07306 291 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 ITGB8P26012 769 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
PRPF18-202ENST00000378572 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 CCPG1Q9ULG6 757 aa16.12■□□□□ 0.17
PRPF18-202ENST00000378572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRPF18-202ENST00000378572 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRPF18-202ENST00000378572 FGD4Q96M96 766 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
PRPF18-202ENST00000378572 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
PRPF18-202ENST00000378572 ASB14A6NK59 587 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 TLR3O15455 904 aaKnown RBP16.11■□□□□ 0.17
PRPF18-202ENST00000378572 ADCY6O43306 1168 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 TNFAIP2Q03169 654 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 FAAP100Q0VG06 881 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 ANKRD33Q7Z3H0 272 aa16.11■□□□□ 0.17
PRPF18-202ENST00000378572 CCDC171Q6TFL3 1326 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 FOXP2O15409 715 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 CST5P28325 142 aaPredicted RBP16.1■□□□□ 0.17
PRPF18-202ENST00000378572 EPHB4P54760 987 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 GJA9P57773 515 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 SMAD3P84022 425 aaKnown RBP16.1■□□□□ 0.17
PRPF18-202ENST00000378572 BEX3Q00994 111 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 DCAF4Q8WV16 495 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 TOX2Q96NM4 488 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 AP5M1Q9H0R1 490 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 ZNF536O15090 1300 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 ELP1O95163 1332 aa16.1■□□□□ 0.17
PRPF18-202ENST00000378572 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
PRPF18-202ENST00000378572 LAMA2P24043 3122 aaKnown RBP16.09■□□□□ 0.17
PRPF18-202ENST00000378572 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
PRPF18-202ENST00000378572 HAND2P61296 217 aa16.09■□□□□ 0.17
PRPF18-202ENST00000378572 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
PRPF18-202ENST00000378572 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
PRPF18-202ENST00000378572 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
PRPF18-202ENST00000378572 PPP1R12CQ9BZL4 782 aa16.09■□□□□ 0.17
PRPF18-202ENST00000378572 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
PRPF18-202ENST00000378572 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
PRPF18-202ENST00000378572 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.08■□□□□ 0.17
PRPF18-202ENST00000378572 ORC4O43929 436 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 SLC16A2P36021 539 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.17
PRPF18-202ENST00000378572 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.17
PRPF18-202ENST00000378572 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.17
PRPF18-202ENST00000378572 MYLIPQ8WY64 445 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 SEMA6BQ9H3T3 888 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.17
PRPF18-202ENST00000378572 ARVCFO00192 962 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 PLA2G6O60733 806 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 TIMP1P01033 207 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 FOSL2P15408 326 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 SYDE2Q5VT97 1194 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
PRPF18-202ENST00000378572 LRRC37A2A6NM11 1700 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 ZEB2O60315 1214 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 TOP1P11387 765 aaKnown RBP16.07■□□□□ 0.16
PRPF18-202ENST00000378572 ANAPC15P60006 121 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 PPIGQ13427 754 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■■■■□ 25.5
PRPF18-202ENST00000378572 FSCN1Q16658 493 aaKnown RBP16.07■□□□□ 0.16
PRPF18-202ENST00000378572 TTBK2Q6IQ55 1244 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 CXCL17Q6UXB2 119 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 MAFAQ8NHW3 353 aaPredicted RBP16.07■□□□□ 0.16
PRPF18-202ENST00000378572 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 DSCC1Q9BVC3 393 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 KATNBL1Q9H079 304 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 CYP39A1Q9NYL5 469 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 TBX21Q9UL17 535 aa16.07■□□□□ 0.16
PRPF18-202ENST00000378572 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
PRPF18-202ENST00000378572 FGAP02671 866 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 ICAM1P05362 532 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 HSPA4P34932 840 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 PTH1RQ03431 593 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 ALX1Q15699 326 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 TMEM199Q8N511 208 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
PRPF18-202ENST00000378572 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
PRPF18-202ENST00000378572 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
PRPF18-202ENST00000378572 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms