RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 COG2Q14746 738 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
C9orf85-202ENST00000377027 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 TANGO6Q9C0B7 1094 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
C9orf85-202ENST00000377027 SWAP70Q9UH65 585 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 DDX20Q9UHI6 824 aaKnown RBP11.48□□□□□ -0.57
C9orf85-202ENST00000377027 ADAMTS5Q9UNA0 930 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 ROBO3Q96MS0 1386 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 MCM3APO60318 1980 aa11.48□□□□□ -0.57
C9orf85-202ENST00000377027 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
C9orf85-202ENST00000377027 CTHP32929 405 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 TMEM132AQ24JP5 1023 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
C9orf85-202ENST00000377027 SHCBP1Q8NEM2 672 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 OSBP2Q969R2 916 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 LRRCC1Q9C099 1032 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 LCTP09848 1927 aa11.47□□□□□ -0.57
C9orf85-202ENST00000377027 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 FLOT1O75955 427 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 RASA1P20936 1047 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 PRAMEF19Q5SWL8 479 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 MFSD14CQ5VZR4 134 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 Q7L0L9 218 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 LPAR1Q92633 364 aa11.46□□□□□ -0.57
C9orf85-202ENST00000377027 STRBPQ96SI9 672 aaKnown RBP11.46□□□□□ -0.57
C9orf85-202ENST00000377027 ZNF214Q9UL59 606 aaPredicted RBP11.46□□□□□ -0.57
C9orf85-202ENST00000377027 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 M0R2C6 588 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 WDR46O15213 610 aaKnown RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 GJC2Q5T442 439 aaPredicted RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 ZNF697Q5TEC3 545 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 TDHQ8IZJ6 230 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 OTUD7AQ8TE49 926 aaPredicted RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 NUP88Q99567 741 aaPredicted RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 SENP6Q9GZR1 1112 aaPredicted RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 DCTPP1Q9H773 170 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 CWC22Q9HCG8 908 aaKnown RBP11.45□□□□□ -0.58
C9orf85-202ENST00000377027 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 IVNS1ABPQ9Y6Y0 642 aa11.45□□□□□ -0.58
C9orf85-202ENST00000377027 CHD9Q3L8U1 2897 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 REV3LO60673 3130 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 DNM1LO00429 736 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 FOXP2O15409 715 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 STRNO43815 780 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
C9orf85-202ENST00000377027 CNGA1P29973 690 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 NCAPG2Q86XI2 1143 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 KBTBD3Q8NAB2 608 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 SEC62Q99442 399 aaKnown RBP11.44□□□□□ -0.58
C9orf85-202ENST00000377027 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 ECHDC1Q9NTX5 307 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 PPP1R9AQ9ULJ8 1098 aa11.44□□□□□ -0.58
C9orf85-202ENST00000377027 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 VWA5AO00534 786 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 SEPT4O43236 478 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 PGK2P07205 417 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 RTP1P59025 263 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 PLS1Q14651 629 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 SNX17Q15036 470 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 DPP9Q86TI2 863 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 ABRAQ8N0Z2 381 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 LENG1Q96BZ8 264 aaPredicted RBP11.43□□□□□ -0.58
C9orf85-202ENST00000377027 FGD4Q96M96 766 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 MROH8Q9H579 483 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
C9orf85-202ENST00000377027 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 TACC3Q9Y6A5 838 aa11.43□□□□□ -0.58
C9orf85-202ENST00000377027 GPAA1O43292 621 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 MSCO60682 206 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 LRRC41Q15345 812 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 APPBP2Q92624 585 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 UBE2OQ9C0C9 1292 aaKnown RBP11.42□□□□□ -0.58
C9orf85-202ENST00000377027 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 KANSL2Q9H9L4 492 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 MUC3AQ02505 3323 aa11.42□□□□□ -0.58
C9orf85-202ENST00000377027 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
C9orf85-202ENST00000377027 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms