RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 ASB3Q9Y575 518 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MYH7P12883 1935 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MYO5AQ9Y4I1 1855 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SH3TC1Q8TE82 1336 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SPDYE5A6NIY4 337 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SEMA3EO15041 775 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 COBLO75128 1261 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 SMIM24O75264 130 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MAP3K12Q12852 859 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 DPYDQ12882 1025 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 RAB11FIP4Q86YS3 637 aa10.6□□□□□ -0.71
SF3A3-201ENST00000373019 RBM12BQ8IXT5 1001 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 MMTAG2Q9BU76 263 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 QTRT2Q9H974 415 aaKnown RBP10.6□□□□□ -0.71
SF3A3-201ENST00000373019 TTC26A0AVF1 554 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 TRIM37O94972 964 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 TOM1L2Q6ZVM7 507 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 MAATS1Q7Z4T9 603 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 TBC1D1Q86TI0 1168 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-201ENST00000373019 SMYD4Q8IYR2 804 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-201ENST00000373019 OSBPL1AQ9BXW6 950 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 PICK1Q9NRD5 415 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 C4AP0C0L4 1744 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 C4BP0C0L5 1744 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 AFF2P51816 1311 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 ESYT3A0FGR9 886 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 CCT8L1PA6NM43 557 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 PAEPP09466 180 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 CCNG1P51959 295 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 ANKRD20A2Q5SQ80 823 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 ANKRD20A1Q5TYW2 823 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 ANKRD20A3Q5VUR7 823 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 ERICH1Q86X53 443 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-201ENST00000373019 CCDC63Q8NA47 563 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 DNAJC7Q99615 494 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 MYH10P35580 1976 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 AHDC1Q5TGY3 1603 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-201ENST00000373019 KRT86O43790 486 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 DRD4P21917 467 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 TRADDQ15628 312 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 USHBP1Q8N6Y0 703 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 PSMD1Q99460 953 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 VPS16Q9H269 839 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 PCMTD2Q9NV79 361 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 LIMA1Q9UHB6 759 aaKnown RBP10.59□□□□□ -0.71
SF3A3-201ENST00000373019 AGAP1Q9UPQ3 857 aa10.59□□□□□ -0.71
SF3A3-201ENST00000373019 MON2Q7Z3U7 1717 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 H0YGN5 161 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 VAV2P52735 878 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 GKAP1Q5VSY0 366 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 MAEAQ7L5Y9 396 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 SMCR8Q8TEV9 937 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 RBM12Q9NTZ6 932 aaKnown RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 WDR35Q9P2L0 1181 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 TRPC5Q9UL62 973 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 NFS1Q9Y697 457 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 STXBP3O00186 592 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 N4BP3O15049 544 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 CASP1P29466 404 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 PAK2Q13177 524 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 CCDC170Q8IYT3 715 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
SF3A3-201ENST00000373019 PLAAQ9Y263 795 aa10.58□□□□□ -0.72
SF3A3-201ENST00000373019 MACROD2A1Z1Q3 448 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 IFIT3O14879 490 aaKnown RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 CXCR5P32302 372 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 GUCY2FP51841 1108 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 KCNJ2P63252 427 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 G3BP1Q13283 466 aaKnown RBP eCLIP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 CAPN6Q9Y6Q1 641 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 DDX60Q8IY21 1712 aaKnown RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 GSTA1P08263 222 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 PRLRP16471 622 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 CCND1P24385 295 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 KRT40Q6A162 431 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 NFRKBQ6P4R8 1299 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 DNAJC14Q6Y2X3 702 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 IL17REQ8NFR9 667 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 DBNLQ9UJU6 430 aaKnown RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 FBXO2Q9UK22 296 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-201ENST00000373019 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 MRC1P22897 1456 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 A8MUI8 341 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 SCNN1BP51168 640 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 TRIM14Q14142 442 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 TEKT4Q8WW24 435 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 SYT15Q9BQS2 421 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms