RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 FAM26FQ5R3K3 315 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 P2RX5Q93086 422 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 NAP1L4Q99733 375 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 MRPL44Q9H9J2 332 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 PANK4Q9NVE7 773 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 TMEM260Q9NX78 707 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 SAR1BQ9Y6B6 198 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 EPB41P11171 864 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 OAS2P29728 719 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 UBXN2AP68543 259 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 SLC9C1Q4G0N8 1177 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 RBM43Q6ZSC3 357 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 CLEC10AQ8IUN9 316 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 MYCT1Q8N699 235 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
PTPRK-206ENST00000368215 EPC1Q9H2F5 836 aa9.4□□□□□ -0.9
PTPRK-206ENST00000368215 ORC4O43929 436 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 HSF2BPO75031 334 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 RCAN1P53805 252 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 KLHL30Q0D2K2 578 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 C12orf60Q5U649 245 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 ARL6IP4Q66PJ3 421 aaKnown RBP9.4□□□□□ -0.91
PTPRK-206ENST00000368215 PHF20Q9BVI0 1012 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 TUBE1Q9UJT0 475 aa9.4□□□□□ -0.91
PTPRK-206ENST00000368215 TRPC5Q9UL62 973 aaPredicted RBP9.4□□□□□ -0.91
PTPRK-206ENST00000368215 TCRBV5S4A2TA0A5A2 114 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 POTEMA6NI47 508 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 BUB1O43683 1085 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 PDE6BP35913 854 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 CYP27A1Q02318 531 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 NTRK3Q16288 839 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 IFI16Q16666 785 aaKnown RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 ASPRV1Q53RT3 343 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 TCP11X2Q5H9J9 407 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 TXNRD3Q86VQ6 643 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 DHX37Q8IY37 1157 aaKnown RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 NT5C3AQ9H0P0 336 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 PABPC4Q13310 644 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 ASIC2Q16515 512 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 UTP14CQ5TAP6 766 aaKnown RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 GLT8D2Q9H1C3 349 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 DCCP43146 1447 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 SHTN1A0MZ66 631 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 MEIS1O00470 390 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 MFAP3LO75121 409 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 ATP2C1P98194 919 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 SMCR8Q8TEV9 937 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-206ENST00000368215 RSPH14Q9UHP6 348 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 CDC23Q9UJX2 597 aa9.39□□□□□ -0.91
PTPRK-206ENST00000368215 LAD1O00515 517 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 TOB1P50616 345 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 CLCN6P51797 869 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 POLR2FP61218 127 aaKnown RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 SMC1AQ14683 1233 aaKnown RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 AK8Q96MA6 479 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 DLGAP5Q15398 846 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 ZMYND10O75800 440 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 MYCLP12524 364 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 EEF1GP26641 437 aaKnown RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 TROAPQ12815 778 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 GRM4Q14833 912 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 ABCB5Q2M3G0 1257 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 RGS22Q8NE09 1264 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 DHTKD1Q96HY7 919 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 SELENOOQ9BVL4 669 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 POLD4Q9HCU8 107 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 ARHGEF35A5YM69 484 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 CCNE1P24864 410 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 VAV2P52735 878 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 GPATCH4Q5T3I0 446 aaKnown RBP9.38□□□□□ -0.91
PTPRK-206ENST00000368215 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 FRMD4BQ9Y2L6 1034 aa9.38□□□□□ -0.91
PTPRK-206ENST00000368215 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 TUBB4BP68371 445 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 ADAM9Q13443 819 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 TUBB2AQ13885 445 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 C8orf74Q6P047 294 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 RIOK1Q9BRS2 568 aaKnown RBP9.37□□□□□ -0.91
PTPRK-206ENST00000368215 TUBB2BQ9BVA1 445 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 SPATA31A5Q5VU36 1347 aa9.37□□□□□ -0.91
PTPRK-206ENST00000368215 SPATA31A7Q8IWB4 1347 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms