RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PPP1R2P41236 205 aa22.3■■□□□ 1.16
CDC42BPB-201ENST00000361246 PDE6CP51160 858 aa22.3■■□□□ 1.16
CDC42BPB-201ENST00000361246 USP44Q9H0E7 712 aa22.3■■□□□ 1.16
CDC42BPB-201ENST00000361246 PDE8BO95263 885 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 POLR2FP61218 127 aaKnown RBP22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 LRRC41Q15345 812 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 PALM2Q8IXS6 379 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 UHMK1Q8TAS1 419 aaKnown RBP22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 PIGBQ92521 554 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 METP08581 1390 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 EVCP57679 992 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 NFX1Q12986 1120 aaKnown RBP22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 SNX25Q9H3E2 840 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 ODR4Q5SWX8 454 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 PIGSQ96S52 555 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 THAP12O43422 761 aa22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 SDCCAG8Q86SQ7 713 aaPredicted RBP22.29■■□□□ 1.16
CDC42BPB-201ENST00000361246 TFAMQ00059 246 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 MORC3Q14149 939 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 METTL23Q86XA0 190 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 NXF1Q9UBU9 619 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 CLIC4Q9Y696 253 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 RPUSD2Q8IZ73 545 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 MKRN1Q9UHC7 482 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 LEMD3Q9Y2U8 911 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 ZMYM6O95789 1325 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 ACTN4O43707 911 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 INTS4Q96HW7 963 aaKnown RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 PPP1R12AO14974 1030 aaPredicted RBP22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 ANKRD42Q8N9B4 389 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 KRT12Q99456 494 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 RETREG2Q8NC44 543 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 MOSPD1Q9UJG1 213 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
CDC42BPB-201ENST00000361246 BTBD18B2RXH4 712 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 EIF2AK2P19525 551 aaKnown RBP22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 KMT5AQ9NQR1 393 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 ANKRD36BP1Q96IX9 119 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 KCNJ18B7U540 433 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 GUCY2FP51841 1108 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 KCNJ12Q14500 433 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 HHATQ5VTY9 493 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 MED23Q9ULK4 1368 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 PTGDRQ13258 359 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 NAA35Q5VZE5 725 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 LCORLQ8N3X6 602 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 CEP170P1Q96L14 293 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 RILPQ96NA2 401 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 PTPN22Q9Y2R2 807 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 SUSD4Q5VX71 490 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 FAM149B1Q96BN6 582 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 UBN1Q9NPG3 1134 aa22.27■■□□□ 1.16
CDC42BPB-201ENST00000361246 USP14P54578 494 aa22.27■■□□□ 1.15
CDC42BPB-201ENST00000361246 TFDP1Q14186 410 aa22.27■■□□□ 1.15
CDC42BPB-201ENST00000361246 GABPB2Q8TAK5 448 aaPredicted RBP22.27■■□□□ 1.15
CDC42BPB-201ENST00000361246 RPS6KA1Q15418 735 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 CC2D2BQ6DHV5 1058 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 SYMPKQ92797 1274 aaKnown RBP22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 RBSNQ9H1K0 784 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 FYB2Q5VWT5 728 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 CIB2O75838 187 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 STAT1P42224 750 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 PPP4R4Q6NUP7 873 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 KRT222Q8N1A0 295 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 NUP58Q9BVL2 599 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 CLGNO14967 610 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 FAM184BQ9ULE4 1060 aa22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 SCAF8Q9UPN6 1271 aaKnown RBP22.26■■□□□ 1.15
CDC42BPB-201ENST00000361246 SYDE2Q5VT97 1194 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 CFAP57Q96MR6 1250 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 PFKFB1P16118 471 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 CD58P19256 250 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 CALCOCO1Q9P1Z2 691 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 ADAM9Q13443 819 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 TRIM14Q14142 442 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 FAM76AQ8TAV0 307 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 IFIH1Q9BYX4 1025 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 RRP9O43818 475 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 MECOMQ03112 1051 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 NOSTRINQ8IVI9 506 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 TPCN1Q9ULQ1 816 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
CDC42BPB-201ENST00000361246 KCNK3O14649 394 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 BMP3P12645 472 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 SLC12A1Q13621 1099 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 CARD6Q9BX69 1037 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 AMNQ9BXJ7 453 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 TDRD3Q9H7E2 651 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 MAD1L1Q9Y6D9 718 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 ATL3Q6DD88 541 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 ALKBH8Q96BT7 664 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 SOS2Q07890 1332 aaPredicted RBP22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 GSTA1P08263 222 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 GSTA2P09210 222 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 NPR1P16066 1061 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms