RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 KCNB1Q14721 858 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 KLHL10Q6JEL2 608 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 NAP1L4Q99733 375 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 GTPBP4Q9BZE4 634 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 MTFR1LQ9H019 292 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 TDRD3Q9H7E2 651 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 SAMSN1Q9NSI8 373 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 KBTBD4Q9NVX7 518 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 TMEM260Q9NX78 707 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 RWDD2AQ9UIY3 292 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 DYNC1I1O14576 645 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 SLC1A4P43007 532 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 TMEM266Q2M3C6 531 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 NAALADL2Q58DX5 795 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 CDKAL1Q5VV42 579 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 KCTD1Q719H9 257 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 SLC16A10Q8TF71 515 aa20.63■□□□□ 0.89
PDLIM7-203ENST00000359895 A0A1B0GTH6 734 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 USP17L10C9JJH3 530 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 CLK2P49760 499 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 FXR2P51116 673 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 ICA1Q05084 483 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 CALCRLQ16602 461 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 RSBN1LQ6PCB5 846 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 CCAR2Q8N163 923 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 GMCL1P1Q8NEA9 526 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 CCDC47Q96A33 483 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 RAB34Q9BZG1 259 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 INTS13Q9NVM9 706 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 HDAC9Q9UKV0 1011 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 SYNPO2Q9UMS6 1093 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 CTNND2Q9UQB3 1225 aa20.62■□□□□ 0.89
PDLIM7-203ENST00000359895 FAM196BA6NMK8 535 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 PP2D1A8MPX8 630 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 TMEM232C9JQI7 657 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 KIF2AO00139 706 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 CCP110O43303 1012 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 PPP1R11O60927 126 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 TNNT1P13805 278 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 SPAG1Q07617 926 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 PAK1Q13153 545 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 TBX2Q13207 712 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 NR1I3Q14994 352 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 SEPT2Q15019 361 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 FILIP1LQ4L180 1135 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 RBM26Q5T8P6 1007 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 SPECC1LQ69YQ0 1117 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 MCTP2Q6DN12 878 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 PPP4R3AQ6IN85 833 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 CALML4Q96GE6 196 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 PRMT6Q96LA8 375 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 C16orf45Q96MC5 204 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 MTMR9Q96QG7 549 aa20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 HERC5Q9UII4 1024 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-203ENST00000359895 GCFC2P16383 781 aaKnown RBP20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 PLCG1P19174 1290 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 SLC16A2P36021 539 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 STX17P56962 302 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 AMPD3Q01432 767 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 SMYD4Q8IYR2 804 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
PDLIM7-203ENST00000359895 VIL1P09327 827 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 GTF2F1P35269 517 aaKnown RBP eCLIP20.59■□□□□ 0.893e-6■■□□□ 12.7
PDLIM7-203ENST00000359895 TECP42680 631 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 STIM1Q13586 685 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 PDIA5Q14554 519 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 HSP90AA4PQ58FG1 418 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 TMX1Q9H3N1 280 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 PSTPIP2Q9H939 334 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 SPON1Q9HCB6 807 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 RHOBTB3O94955 611 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 TNNI2P48788 182 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 QRICH1Q2TAL8 776 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 FCHSD1Q86WN1 690 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 LARGE2Q8N3Y3 721 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 ANKRD20A12PQ8NF67 263 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 NELFBQ8WX92 580 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 STK17AQ9UEE5 414 aa20.59■□□□□ 0.89
PDLIM7-203ENST00000359895 SPDYE2BA6NHP3 402 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 TUBB4AP04350 444 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 SPDYE6P0CI01 402 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 SLURP2P0DP57 97 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 PPP1R2P41236 205 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 TXKP42681 527 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 PTGER2P43116 358 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 KMT5BQ4FZB7 885 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 NYAP1Q6ZVC0 841 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 SIAH1Q8IUQ4 282 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 CSRNP1Q96S65 589 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 C7orf25Q9BPX7 421 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 LRWD1Q9UFC0 647 aa20.58■□□□□ 0.88
PDLIM7-203ENST00000359895 F5H6K3 240 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 KLRC4O43908 158 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 RAD21O60216 631 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms