RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 GJA9P57773 515 aa20.84■□□□□ 0.93
HDDC3-201ENST00000330334 PWP2Q15269 919 aaKnown RBP20.84■□□□□ 0.93
HDDC3-201ENST00000330334 PCSK9Q8NBP7 692 aaKnown RBP20.84■□□□□ 0.93
HDDC3-201ENST00000330334 MORC4Q8TE76 937 aa20.84■□□□□ 0.93
HDDC3-201ENST00000330334 LENG1Q96BZ8 264 aaPredicted RBP20.84■□□□□ 0.93
HDDC3-201ENST00000330334 TOX2Q96NM4 488 aa20.84■□□□□ 0.93
HDDC3-201ENST00000330334 SPC25Q9HBM1 224 aa20.84■□□□□ 0.93
HDDC3-201ENST00000330334 GPCPD1Q9NPB8 672 aa20.84■□□□□ 0.93
HDDC3-201ENST00000330334 FRMPD2Q68DX3 1309 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-201ENST00000330334 KDM4AO75164 1064 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 TLE2Q04725 743 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 KCNA10Q16322 511 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 ANKRD33Q7Z3H0 272 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 KRT23Q9C075 422 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 CNNM2Q9H8M5 875 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
HDDC3-201ENST00000330334 ELP1O95163 1332 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 WDR19Q8NEZ3 1342 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 RAD50Q92878 1312 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 ADCY6O43306 1168 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 RUFY2Q8WXA3 655 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 LRCH3Q96II8 777 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
HDDC3-201ENST00000330334 MAF1Q9H063 256 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
HDDC3-201ENST00000330334 ASTN1O14525 1302 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 IQSEC1Q6DN90 963 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 NSMFQ6X4W1 530 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 PNMA1Q8ND90 353 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 ZKSCAN3Q9BRR0 538 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 STARD7Q9NQZ5 370 aa20.81■□□□□ 0.92
HDDC3-201ENST00000330334 ADD3Q9UEY8 706 aaKnown RBP20.81■□□□□ 0.92
HDDC3-201ENST00000330334 TRIM43BA6NCK2 446 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 B4E1Z4 1266 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 C6orf222P0C671 652 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-201ENST00000330334 TNFAIP2Q03169 654 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 BAATQ14032 418 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-201ENST00000330334 RGS22Q8NE09 1264 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 CLEC4DQ8WXI8 215 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 TRIM43Q96BQ3 446 aaPredicted RBP20.8■□□□□ 0.92
HDDC3-201ENST00000330334 GLT1D1Q96MS3 346 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 IL25Q9H293 177 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 KAT14Q9H8E8 782 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 GNEQ9Y223 722 aaKnown RBP20.8■□□□□ 0.92
HDDC3-201ENST00000330334 Q9Y3F1 56 aa20.8■□□□□ 0.92
HDDC3-201ENST00000330334 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
HDDC3-201ENST00000330334 MYADML2A6NDP7 307 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 NFIBO00712 420 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 CTAGE5O15320 804 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 CLTBP09497 229 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 CHMLP26374 656 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 GNASQ5JWF2 1037 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 TAPT1Q6NXT6 567 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 ENAHQ8N8S7 591 aaPredicted RBP20.79■□□□□ 0.92
HDDC3-201ENST00000330334 VTA1Q9NP79 307 aa20.79■□□□□ 0.92
HDDC3-201ENST00000330334 PRDM5Q9NQX1 630 aaPredicted RBP20.79■□□□□ 0.92
HDDC3-201ENST00000330334 ASGR1P07306 291 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 CDK7P50613 346 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 IRX6P78412 446 aaPredicted RBP20.78■□□□□ 0.92
HDDC3-201ENST00000330334 ASPRV1Q53RT3 343 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 SH3RF1Q7Z6J0 888 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 LAMA4Q16363 1823 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
HDDC3-201ENST00000330334 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-201ENST00000330334 DCDC2CA8MYV0 355 aa20.77■□□□□ 0.92
HDDC3-201ENST00000330334 RNF207Q6ZRF8 634 aa20.77■□□□□ 0.92
HDDC3-201ENST00000330334 BADQ92934 168 aa20.77■□□□□ 0.92
HDDC3-201ENST00000330334 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
HDDC3-201ENST00000330334 U3KPZ7 1027 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-201ENST00000330334 MCM3APO60318 1980 aa20.77■□□□□ 0.92
HDDC3-201ENST00000330334 TNKSO95271 1327 aa20.77■□□□□ 0.91
HDDC3-201ENST00000330334 PTPDC1A2A3K4 754 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 PQBP1O60828 265 aaKnown RBP20.76■□□□□ 0.91
HDDC3-201ENST00000330334 CABYRO75952 493 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 GOLGA8HP0CJ92 632 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 SMPD1P17405 629 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 ALDH5A1P51649 535 aaPredicted RBP20.76■□□□□ 0.91
HDDC3-201ENST00000330334 FAAP100Q0VG06 881 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 NOL8Q76FK4 1167 aaKnown RBP20.76■□□□□ 0.91
HDDC3-201ENST00000330334 DNERQ8NFT8 737 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 PURBQ96QR8 312 aaKnown RBP20.76■□□□□ 0.91
HDDC3-201ENST00000330334 SEZ6LQ9BYH1 1024 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 UBA5Q9GZZ9 404 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 TMEM39AQ9NV64 488 aa20.76■□□□□ 0.91
HDDC3-201ENST00000330334 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
HDDC3-201ENST00000330334 ARVCFO00192 962 aa20.75■□□□□ 0.91
HDDC3-201ENST00000330334 RPS6P62753 249 aaKnown RBP20.75■□□□□ 0.91
HDDC3-201ENST00000330334 IRX5P78411 483 aaPredicted RBP20.75■□□□□ 0.91
HDDC3-201ENST00000330334 TRDNQ13061 729 aa20.75■□□□□ 0.91
HDDC3-201ENST00000330334 TLK2Q86UE8 772 aa20.75■□□□□ 0.91
HDDC3-201ENST00000330334 MPHOSPH6Q99547 160 aaKnown RBP20.75■□□□□ 0.91
HDDC3-201ENST00000330334 AP5M1Q9H0R1 490 aa20.75■□□□□ 0.91
HDDC3-201ENST00000330334 PDGFCQ9NRA1 345 aa20.75■□□□□ 0.91
HDDC3-201ENST00000330334 RBM47A0AV96 593 aaKnown RBP20.74■□□□□ 0.91
HDDC3-201ENST00000330334 SGSM2O43147 1006 aa20.74■□□□□ 0.91
HDDC3-201ENST00000330334 ZEB2O60315 1214 aa20.74■□□□□ 0.91
HDDC3-201ENST00000330334 PARP1P09874 1014 aaKnown RBP20.74■□□□□ 0.91
HDDC3-201ENST00000330334 EDNRBP24530 442 aa20.74■□□□□ 0.91
HDDC3-201ENST00000330334 ITGB8P26012 769 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms