RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 MCM8Q9UJA3 840 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 V9GYQ6 96 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 CHD4Q14839 1912 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 ZNF18P17022 549 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 IFT88Q13099 833 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 TAOK1Q7L7X3 1001 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 SNX19Q92543 992 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 FAM149B1Q96BN6 582 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 CLCA2Q9UQC9 943 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 ATXN3P54252 364 aaPredicted RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 DBF4Q9UBU7 674 aaPredicted RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 PLS3P13797 630 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 ATXN7L3BQ96GX2 97 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 GADD45BO75293 160 aaPredicted RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 SEC31AO94979 1220 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 DCAF4L1Q3SXM0 396 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 KIAA1841Q6NSI8 718 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 C7orf31Q8N865 590 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 F13A1P00488 732 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 C16orf87Q6PH81 154 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 GOLGA5Q8TBA6 731 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 SECISBP2LQ93073 1101 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 MEIS1O00470 390 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 CAPN15O75808 1086 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 DDX5P17844 614 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 TRIM32Q13049 653 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 CCNYQ8ND76 341 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 ATAD2Q6PL18 1390 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 SUPT6HQ7KZ85 1726 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 A0A1B0GUA9 196 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 GAS7O60861 476 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 SLC1A4P43007 532 aa8.18□□□□□ -1.1
USP9X-201ENST00000324545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP9X-201ENST00000324545 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
USP9X-201ENST00000324545 SLFN5Q08AF3 891 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 KDELC2Q7Z4H8 507 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 PCM1Q15154 2024 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 FAM135AQ9P2D6 1515 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 OTUD7AQ8TE49 926 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 JAK2O60674 1132 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 RPS6P62753 249 aaKnown RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 C2orf54Q08AI8 447 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 IFIH1Q9BYX4 1025 aaKnown RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 CAMSAP2Q08AD1 1489 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 MESDQ14696 234 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 TDRD7Q8NHU6 1098 aaKnown RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 KCNQ4P56696 695 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 FANCCQ00597 558 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 RPS6KA1Q15418 735 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 E2F4Q16254 413 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 BRDTQ58F21 947 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 CYP26C1Q6V0L0 522 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 PCIF1Q9H4Z3 704 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 CD58P19256 250 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 RPL13P26373 211 aaKnown RBP8.17□□□□□ -1.1
USP9X-201ENST00000324545 TCEA2Q15560 299 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 PI4KAP42356 2102 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 UNC13CQ8NB66 2214 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 DDHD2O94830 711 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 MLXIPQ9HAP2 919 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 PRR23AA6NEV1 266 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 MAP2K2P36507 400 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 POLA2Q14181 598 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 GPBP1Q86WP2 473 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 ANKRD13CQ8N6S4 541 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
USP9X-201ENST00000324545 PRPF4O43172 522 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP9X-201ENST00000324545 CFTRP13569 1480 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP9X-201ENST00000324545 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP9X-201ENST00000324545 ATF2P15336 505 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 CCT5P48643 541 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 ENOX1Q8TC92 643 aaKnown RBP8.16□□□□□ -1.1
USP9X-201ENST00000324545 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 SCYL3Q8IZE3 742 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 TRIML1Q8N9V2 468 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 DNAAF3Q8N9W5 541 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 SPZ1Q9BXG8 430 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 ZBED4O75132 1171 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 PASD1Q8IV76 773 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 TEKT1Q969V4 418 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 EVI5O60447 810 aa8.16□□□□□ -1.1
USP9X-201ENST00000324545 CTNNA1P35221 906 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms