RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 MTFR1LQ9H019 292 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 ZNF70Q9UC06 446 aaPredicted RBP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 SLFN14P0C7P3 912 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 CBX1P83916 185 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 SEPT2Q15019 361 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 SPATA20Q8TB22 786 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 CSRNP1Q96S65 589 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 PYM1Q9BRP8 204 aaKnown RBP20.64■□□□□ 0.89
SHISA3-201ENST00000319234 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
SHISA3-201ENST00000319234 PHLPP2Q6ZVD8 1323 aa20.64■□□□□ 0.89
SHISA3-201ENST00000319234 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
SHISA3-201ENST00000319234 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 KCTD1Q719H9 257 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 MTMR8Q96EF0 704 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 HERC5Q9UII4 1024 aaKnown RBP20.63■□□□□ 0.89
SHISA3-201ENST00000319234 MYH4Q9Y623 1939 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 TCP10L2B9ZVM9 353 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 LAD1O00515 517 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 PRR29P0C7W0 189 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 ZNF18P17022 549 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 ICA1Q05084 483 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 RBM26Q5T8P6 1007 aaKnown RBP20.63■□□□□ 0.89
SHISA3-201ENST00000319234 UTP14CQ5TAP6 766 aaKnown RBP20.63■□□□□ 0.89
SHISA3-201ENST00000319234 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 SH3RF1Q7Z6J0 888 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 REXO1Q8N1G1 1221 aaKnown RBP20.63■□□□□ 0.89
SHISA3-201ENST00000319234 MTMR14Q8NCE2 650 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 FAM151AQ8WW52 585 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 COA7Q96BR5 231 aa20.63■□□□□ 0.89
SHISA3-201ENST00000319234 CLRN2A0PK11 232 aa20.62■□□□□ 0.89
SHISA3-201ENST00000319234 GDF11O95390 407 aa20.62■□□□□ 0.89
SHISA3-201ENST00000319234 ERCC5P28715 1186 aaPredicted RBP20.62■□□□□ 0.89
SHISA3-201ENST00000319234 ADCY7P51828 1080 aa20.62■□□□□ 0.89
SHISA3-201ENST00000319234 ETF1P62495 437 aaKnown RBP20.62■□□□□ 0.89
SHISA3-201ENST00000319234 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
SHISA3-201ENST00000319234 SPDYE2Q495Y8 402 aa20.62■□□□□ 0.89
SHISA3-201ENST00000319234 ARHGAP6O43182 974 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 ZSCAN12O43309 604 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 NAA30Q147X3 362 aaPredicted RBP20.61■□□□□ 0.89
SHISA3-201ENST00000319234 SYT10Q6XYQ8 523 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 DTHD1Q6ZMT9 781 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 GRAMD1CQ8IYS0 662 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 PAGE5Q96GU1 130 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 USP17L10C9JJH3 530 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 ZBTB5O15062 677 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 SLC16A2P36021 539 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 PRPHP41219 470 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 SLC1A4P43007 532 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 CXCL9Q07325 125 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 FKBP1CQ5VVH2 108 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 NEK8Q86SG6 692 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 IQUBQ8NA54 791 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 TMEM60Q9H2L4 133 aa20.61■□□□□ 0.89
SHISA3-201ENST00000319234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHISA3-201ENST00000319234 BIN2Q9UBW5 565 aaPredicted RBP20.61■□□□□ 0.89
SHISA3-201ENST00000319234 DDX41Q9UJV9 622 aaKnown RBP20.61■□□□□ 0.89
SHISA3-201ENST00000319234 GOLGA6L9A6NEM1 432 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 ORC2Q13416 577 aaPredicted RBP20.6■□□□□ 0.89
SHISA3-201ENST00000319234 JAKMIP3Q5VZ66 844 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 GTPBP4Q9BZE4 634 aaKnown RBP20.6■□□□□ 0.89
SHISA3-201ENST00000319234 TAOK3Q9H2K8 898 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 INTS13Q9NVM9 706 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 NFE2L3Q9Y4A8 694 aa20.6■□□□□ 0.89
SHISA3-201ENST00000319234 PPP1R11O60927 126 aaPredicted RBP20.59■□□□□ 0.89
SHISA3-201ENST00000319234 GH2P01242 217 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 E2F4Q16254 413 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 RIC8AQ9NPQ8 531 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 TMEM232C9JQI7 657 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 RAD21O60216 631 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 ZSCAN20P17040 1043 aaPredicted RBP20.59■□□□□ 0.89
SHISA3-201ENST00000319234 TXLNAP40222 546 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 JAG1P78504 1218 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 DMTNQ08495 405 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 RRP1BQ14684 758 aaKnown RBP20.59■□□□□ 0.89
SHISA3-201ENST00000319234 LETM2Q2VYF4 491 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 SPECC1LQ69YQ0 1117 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 TBCKQ8TEA7 893 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 SRRTQ9BXP5 876 aaKnown RBP20.59■□□□□ 0.89
SHISA3-201ENST00000319234 TMEM260Q9NX78 707 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 CNTNAP1P78357 1384 aa20.59■□□□□ 0.89
SHISA3-201ENST00000319234 SPDYE4A6NLX3 237 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 F5H6K3 240 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 CCNT1O60563 726 aaKnown RBP20.58■□□□□ 0.89
SHISA3-201ENST00000319234 CDK11BP21127 795 aaKnown RBP20.58■□□□□ 0.89
SHISA3-201ENST00000319234 AFMP43652 599 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
SHISA3-201ENST00000319234 KLRC3Q07444 240 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 CIAPIN1Q6FI81 312 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 TMEM139Q8IV31 216 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 JDP2Q8WYK2 163 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 GMCL1Q96IK5 515 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 SYNPO2Q9UMS6 1093 aa20.58■□□□□ 0.89
SHISA3-201ENST00000319234 STX10O60499 249 aa20.57■□□□□ 0.88
SHISA3-201ENST00000319234 ZBED3Q96IU2 234 aaPredicted RBP20.57■□□□□ 0.88
SHISA3-201ENST00000319234 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.57■□□□□ 0.88
SHISA3-201ENST00000319234 OR52Z1P0C646 297 aa20.57■□□□□ 0.88
SHISA3-201ENST00000319234 REXO1L1PQ8IX06 675 aa20.57■□□□□ 0.88
SHISA3-201ENST00000319234 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms