RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GDF11O95390 407 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 CALML3P27482 149 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 SEPT2Q15019 361 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 LONRF3Q496Y0 759 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 FOXP4Q8IVH2 680 aaPredicted RBP14.77□□□□□ -0.04
CPNE1-201ENST00000317677 ZBED3Q96IU2 234 aaPredicted RBP14.77□□□□□ -0.04
CPNE1-201ENST00000317677 SDF4Q9BRK5 362 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 CSRNP2Q9H175 543 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 GPCPD1Q9NPB8 672 aa14.77□□□□□ -0.04
CPNE1-201ENST00000317677 EEF2P13639 858 aaKnown RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 CACTINQ8WUQ7 758 aaKnown RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 KCNH3Q9ULD8 1083 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 PPP1R11O60927 126 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 ATP2B2Q01814 1243 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 IQCB1Q15051 598 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 DLGAP5Q15398 846 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 IL17AQ16552 155 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 ZSCAN26Q16670 478 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 GOLGA5Q8TBA6 731 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 RBM46Q8TBY0 533 aaKnown RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 MKL1Q969V6 931 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 RRP36Q96EU6 259 aaKnown RBP14.76□□□□□ -0.05
CPNE1-201ENST00000317677 ZMYND12Q9H0C1 365 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 CEP131Q9UPN4 1083 aa14.76□□□□□ -0.05
CPNE1-201ENST00000317677 A0A087X0B3 334 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 FOXN1O15353 648 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 CAVIN2O95810 425 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 HSPA6P17066 643 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 PTGDRQ13258 359 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 STX1AQ16623 288 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 SRLQ86TD4 932 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 MTMR14Q8NCE2 650 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 AGBL3Q8NEM8 1001 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 CCDC148Q8NFR7 591 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 CSRNP1Q96S65 589 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 JMJD4Q9H9V9 463 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 NYAP2Q9P242 653 aa14.75□□□□□ -0.05
CPNE1-201ENST00000317677 TRAPPC10P48553 1259 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 ZNF165P49910 485 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 NAPAP54920 295 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 HDAC9Q9UKV0 1011 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 SLC16A2P36021 539 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 CLCN6P51797 869 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 MDM2Q00987 491 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-201ENST00000317677 PNOCQ13519 176 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 LRRC8AQ8IWT6 810 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 DRC7Q8IY82 874 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 ADGRF4Q8IZF3 695 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 FAM151AQ8WW52 585 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 COA7Q96BR5 231 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 ZBTB9Q96C00 473 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 MTMR8Q96EF0 704 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 NRBP1Q9UHY1 535 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 TUBE1Q9UJT0 475 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 JRKLQ9Y4A0 524 aa14.74□□□□□ -0.05
CPNE1-201ENST00000317677 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 SMCO2A6NFE2 343 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 EGFRP00533 1210 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 MCM7P33993 719 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ABCB5Q2M3G0 1257 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 NBPF9Q3BBW0 867 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 DPCR1Q3MIW9 517 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 CIAPIN1Q6FI81 312 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 GALNT17Q6IS24 598 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 TMEM179Q6ZVK1 233 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 FILIP1Q7Z7B0 1213 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 C10orf67Q8IYJ2 551 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 FAM177A1Q8N128 213 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ZNF592Q92610 1267 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 KANSL2Q9H9L4 492 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 A0A1W2PRG0 241 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 USP17L10C9JJH3 530 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 POLR2DO15514 142 aaKnown RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ACTN4O43707 911 aaKnown RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 GH2P01242 217 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ICA1Q05084 483 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 FSTL1Q12841 308 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 INF2Q27J81 1249 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 CCDC96Q2M329 555 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 DHX40Q8IX18 779 aaKnown RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 OGFOD1Q8N543 542 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 NEK11Q8NG66 645 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 JDP2Q8WYK2 163 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 TMEM39BQ9GZU3 492 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 SEC63Q9UGP8 760 aaKnown RBP14.73□□□□□ -0.05
CPNE1-201ENST00000317677 SERTAD1Q9UHV2 236 aa14.73□□□□□ -0.05
CPNE1-201ENST00000317677 ESYT2A0FGR8 921 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 BIN1O00499 593 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms