RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CCDC178Q5BJE1 867 aa23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 GPATCH4Q5T3I0 446 aaKnown RBP23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 RUFY2Q8WXA3 655 aa23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 MAP4K1Q92918 833 aa23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 CNNM2Q9H8M5 875 aa23.26■■□□□ 1.31
PDZRN3-202ENST00000308537 MYH6P13533 1939 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 MYADML2A6NDP7 307 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 CTAGE5O15320 804 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 BMP8BP34820 402 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 ADCYAP1R1P41586 468 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 SLC39A5Q6ZMH5 540 aa23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 ZHX1Q9UKY1 873 aaPredicted RBP23.25■■□□□ 1.31
PDZRN3-202ENST00000308537 KBTBD13C9JR72 458 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 MAGEA10P43363 369 aaPredicted RBP23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 RTP1P59025 263 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 CCDC144BQ3MJ40 725 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 C1orf53Q5VUE5 145 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 UBA5Q9GZZ9 404 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 FAM184BQ9ULE4 1060 aa23.24■■□□□ 1.31
PDZRN3-202ENST00000308537 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 NKX3-2P78367 333 aa23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 SLC35G1Q2M3R5 365 aa23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 FERMT2Q96AC1 680 aa23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 LSG1Q9H089 658 aaKnown RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 UPF3AQ9H1J1 476 aaKnown RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 KAT14Q9H8E8 782 aa23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 SENP2Q9HC62 589 aa23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 U3KPZ7 1027 aaPredicted RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
PDZRN3-202ENST00000308537 A0A1W2PPC1 479 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 E7EWF7 191 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 CST5P28325 142 aaPredicted RBP23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 ANTXR2P58335 489 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 NSMFQ6X4W1 530 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 SLC30A10Q6XR72 485 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
PDZRN3-202ENST00000308537 PTGS1P23219 599 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 ASPRV1Q53RT3 343 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 TMEM63BQ5T3F8 832 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 TAPT1Q6NXT6 567 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 RNF180Q86T96 592 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 ADGRF4Q8IZF3 695 aa23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 GNEQ9Y223 722 aaKnown RBP23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 RBM8AQ9Y5S9 174 aaKnown RBP23.21■■□□□ 1.31
PDZRN3-202ENST00000308537 A0A1W2PQ45 241 aaPredicted RBP23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 A0A1W2PQY0 241 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 ASB14A6NK59 587 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 GJA9P57773 515 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 TRIM60Q495X7 471 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 MB21D2Q8IYB1 491 aaPredicted RBP23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 UBAC1Q9BSL1 405 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 TSEN34Q9BSV6 310 aaKnown RBP23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 PDGFCQ9NRA1 345 aa23.2■■□□□ 1.3
PDZRN3-202ENST00000308537 ALDH5A1P51649 535 aaPredicted RBP23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 CDC37Q16543 378 aaPredicted RBP23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 BMP2KLQ5H9B9 411 aa23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 IFIT1BQ5T764 474 aaKnown RBP23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 MTMR8Q96EF0 704 aa23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 MAD2L2Q9UI95 211 aa23.19■■□□□ 1.3
PDZRN3-202ENST00000308537 SOX1O00570 391 aaPredicted RBP23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 PARP1P09874 1014 aaKnown RBP23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 ACLYP53396 1101 aa23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 FBXO16Q8IX29 292 aaPredicted RBP23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 PDLIM7Q9NR12 457 aa23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 PNMA2Q9UL42 364 aa23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 ATP11BQ9Y2G3 1177 aa23.18■■□□□ 1.3
PDZRN3-202ENST00000308537 LAMA2P24043 3122 aaKnown RBP23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 PALM3A6NDB9 673 aaPredicted RBP23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 SMPD1P17405 629 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 EDNRBP24530 442 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 TROAPQ12815 778 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 KCNA10Q16322 511 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 QRICH1Q2TAL8 776 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 TBC1D5Q92609 795 aa23.17■■□□□ 1.3
PDZRN3-202ENST00000308537 LOC102724159A0A0B4J2E5 919 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 MOXD2PA6NHM9 499 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 OPLAHO14841 1288 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 TLE2Q04725 743 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 PWP2Q15269 919 aaKnown RBP23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 USH1GQ495M9 461 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 RNF207Q6ZRF8 634 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 CHST3Q7LGC8 479 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 SH3RF1Q7Z6J0 888 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 RGS22Q8NE09 1264 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 NCOA7Q8NI08 942 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 IGDCC4Q8TDY8 1250 aa23.16■■□□□ 1.3
PDZRN3-202ENST00000308537 PTPDC1A2A3K4 754 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 TRIM43BA6NCK2 446 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 PPP1R11O60927 126 aaPredicted RBP23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 ITGB8P26012 769 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 MDM2Q00987 491 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms