RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 RIMBP2O15034 1052 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 PRCPP42785 496 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 KSR1Q8IVT5 923 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 ANKRD2Q9GZV1 360 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 TUBE1Q9UJT0 475 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 H2AFXP16104 143 aaPredicted RBP20.34■□□□□ 0.85
ITGB5-201ENST00000296181 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
ITGB5-201ENST00000296181 MAEAQ7L5Y9 396 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 NLRP10Q86W26 655 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 PKD2L1Q9P0L9 805 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
ITGB5-201ENST00000296181 E2F5Q15329 346 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 REXO1L1PQ8IX06 675 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 KCNB2Q92953 911 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 GRIN1Q05586 938 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 SEL1L2Q5TEA6 688 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 NFU1Q9UMS0 254 aa20.33■□□□□ 0.85
ITGB5-201ENST00000296181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.33■□□□□ 0.85
ITGB5-201ENST00000296181 N4BP1O75113 896 aaKnown RBP20.33■□□□□ 0.84
ITGB5-201ENST00000296181 ICE2Q659A1 982 aa20.33■□□□□ 0.84
ITGB5-201ENST00000296181 DHTKD1Q96HY7 919 aaPredicted RBP20.33■□□□□ 0.84
ITGB5-201ENST00000296181 JPH2Q9BR39 696 aaPredicted RBP20.33■□□□□ 0.84
ITGB5-201ENST00000296181 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.84
ITGB5-201ENST00000296181 NRKQ7Z2Y5 1582 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 NAP1L3Q99457 506 aaPredicted RBP20.32■□□□□ 0.84
ITGB5-201ENST00000296181 NUCKS1Q9H1E3 243 aaKnown RBP20.32■□□□□ 0.84
ITGB5-201ENST00000296181 DDAH1O94760 285 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 CLTAP09496 248 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 TRAPPC10P48553 1259 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 LACTBP83111 547 aaPredicted RBP20.32■□□□□ 0.84
ITGB5-201ENST00000296181 FOXO4P98177 505 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 GKAP1Q5VSY0 366 aaPredicted RBP20.32■□□□□ 0.84
ITGB5-201ENST00000296181 TADA2BQ86TJ2 420 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 EFCC1Q9HA90 598 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 NKIRAS1Q9NYS0 192 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
ITGB5-201ENST00000296181 FAM169AQ9Y6X4 670 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 TBC1D8O95759 1140 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 TRIM10Q9UDY6 481 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 PLCG2P16885 1265 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 KIF11P52732 1056 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 ANTXR2P58335 489 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 FAM26FQ5R3K3 315 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 SRLQ86TD4 932 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 CCDC105Q8IYK2 499 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 BICD1Q96G01 975 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 FRMD4BQ9Y2L6 1034 aa20.32■□□□□ 0.84
ITGB5-201ENST00000296181 ESYT3A0FGR9 886 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 RGS16O15492 202 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 PRPF3O43395 683 aaKnown RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 NPHP4O75161 1426 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 GCNT3O95395 438 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 CCNE1P24864 410 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 IFNAR2P48551 515 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ANKRD42Q8N9B4 389 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 EYA3Q99504 573 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ASIC3Q9UHC3 531 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 STK38LQ9Y2H1 464 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 FRMPD2Q68DX3 1309 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 FRMD3A2A2Y4 597 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ATP1A1P05023 1023 aaKnown RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ZNF579Q8NAF0 562 aaKnown RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 PLCG1P19174 1290 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 MTMR3Q13615 1198 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 HLFQ16534 295 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 GPBP1Q86WP2 473 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 NOA1Q8NC60 698 aaKnown RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ARPP21Q9UBL0 812 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 ARMCX3Q9UH62 379 aaPredicted RBP20.31■□□□□ 0.84
ITGB5-201ENST00000296181 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 PCDHA12Q9UN75 941 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 PCDHA13Q9Y5I0 950 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 IKBKGQ9Y6K9 419 aa20.31■□□□□ 0.84
ITGB5-201ENST00000296181 OVOS2A0A0J9YW53 1432 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 OVOS2Q6IE36 1432 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 LLGL1Q15334 1064 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 CCDC170Q8IYT3 715 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 FNBP4Q8N3X1 1017 aaPredicted RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 TBC1D31Q96DN5 1066 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 AMFRQ9UKV5 643 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 ADAM9Q13443 819 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 SETDB1Q15047 1291 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 DENND2CQ68D51 928 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 ZNF622Q969S3 477 aaKnown RBP eCLIP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 FBXO2Q9UK22 296 aaPredicted RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 NBPF26B4DH59 902 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 NBPF10Q6P3W6 841 aaKnown RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 INTS8Q75QN2 995 aaKnown RBP20.3■□□□□ 0.84
ITGB5-201ENST00000296181 NBPF15Q8N660 670 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 IQCDQ96DY2 449 aa20.3■□□□□ 0.84
ITGB5-201ENST00000296181 MLXIPQ9HAP2 919 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms