RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NSMFQ6X4W1 530 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
SH3RF1-201ENST00000284637 FRMPD2Q68DX3 1309 aaPredicted RBP18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 PROCA1Q8NCQ7 364 aaPredicted RBP18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 SAMSN1Q9NSI8 373 aaKnown RBP18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 PRR16Q569H4 304 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 CCDC197Q8NCU1 140 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 CCT6BQ92526 530 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 RNF34Q969K3 372 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 DDX27Q96GQ7 796 aaKnown RBP18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 ABCB6Q9NP58 842 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 KDM3AQ9Y4C1 1321 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 CASQ2O14958 399 aaPredicted RBP18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 KRT19P08727 400 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 CA8P35219 290 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 FAM26FQ5R3K3 315 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 EPSTI1Q96J88 318 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
SH3RF1-201ENST00000284637 SESN3P58005 492 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 KIF23Q02241 960 aaPredicted RBP18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 NUF2Q9BZD4 464 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 PFDN4Q9NQP4 134 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 THAP12O43422 761 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 SLC8A3P57103 927 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 PALM2Q8IXS6 379 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 SUFUQ9UMX1 484 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 GAS7O60861 476 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 ATP1A3P13637 1013 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 CXCR5P32302 372 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 MAN1A1P33908 653 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 LONP1P36776 959 aaKnown RBP18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 PPP2R5EQ16537 467 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 SARM1Q6SZW1 724 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 P3H4Q92791 437 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
SH3RF1-201ENST00000284637 PHKA1P46020 1223 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 EPHB4P54760 987 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 ARMC2Q8NEN0 867 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 STK10O94804 968 aaKnown RBP18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 PPP2R5CQ13362 524 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 MAN1B1Q9UKM7 699 aa18.02■□□□□ 0.48
SH3RF1-201ENST00000284637 ARHGAP42A6NI28 874 aa18.02■□□□□ 0.47
SH3RF1-201ENST00000284637 HEXIM1O94992 359 aaKnown RBP18.02■□□□□ 0.47
SH3RF1-201ENST00000284637 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.02■□□□□ 0.47
SH3RF1-201ENST00000284637 TRIM66O15016 1216 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 TAB3Q8N5C8 712 aaPredicted RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 GEMIN8Q9NWZ8 242 aaKnown RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 MAST3O60307 1309 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 RFC1P35251 1148 aaPredicted RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 NR5A1Q13285 461 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 CCNL1Q9UK58 526 aaPredicted RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 C2orf54Q08AI8 447 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 HIBCHQ6NVY1 386 aaPredicted RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 RASGRP4Q8TDF6 673 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 GJA10Q969M2 543 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 RIC8AQ9NPQ8 531 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 VSTM4Q8IW00 320 aa18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 FOXP1Q9H334 677 aaPredicted RBP18.01■□□□□ 0.47
SH3RF1-201ENST00000284637 M0R2C6 588 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 BAG2O95816 211 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 ATF7P17544 494 aaPredicted RBP18■□□□□ 0.47
SH3RF1-201ENST00000284637 CDC25AP30304 524 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 LRRC47Q8N1G4 583 aaKnown RBP18■□□□□ 0.47
SH3RF1-201ENST00000284637 RSAD2Q8WXG1 361 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 TSC22D3Q99576 134 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 YY1AP1Q9H869 796 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 DKC1O60832 514 aaKnown RBP eCLIP18■□□□□ 0.47
SH3RF1-201ENST00000284637 SLFN14P0C7P3 912 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 RESTQ13127 1097 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
SH3RF1-201ENST00000284637 ST7Q9NRC1 585 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 UBE3CQ15386 1083 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 NBPF9Q3BBW0 867 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 CCHCR1Q8TD31 782 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 MYOM2P54296 1465 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 PPM1KQ8N3J5 372 aa18■□□□□ 0.47
SH3RF1-201ENST00000284637 INTS9Q9NV88 658 aaKnown RBP18■□□□□ 0.47
SH3RF1-201ENST00000284637 CTIFO43310 598 aaKnown RBP18■□□□□ 0.47
SH3RF1-201ENST00000284637 EXOC3L4Q17RC7 722 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 ZBTB38Q8NAP3 1195 aaPredicted RBP17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 TTLL3Q9Y4R7 772 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 PHKG2P15735 406 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 DDX25Q9UHL0 483 aaKnown RBP17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 CYP4A11Q02928 519 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 FAM178BQ8IXR5 827 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 SH3GL3Q99963 347 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms