RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 SLC44A5Q8NCS7 719 aa17.89■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ECE2O60344 883 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SYF2O95926 243 aaKnown RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TROAPQ12815 778 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 PKN1Q16512 942 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NCAPH2Q6IBW4 605 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 AFAP1L1Q8TED9 768 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SERTAD1Q9UHV2 236 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 HOOK1Q9UJC3 728 aaKnown RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 POLR2DO15514 142 aaKnown RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RAD17O75943 681 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 KCNV1Q6PIU1 500 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RASGRP2Q7LDG7 609 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NAPGQ99747 312 aaPredicted RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ACBD3Q9H3P7 528 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RGPD3A6NKT7 1758 aaPredicted RBP17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RGPD4Q7Z3J3 1758 aa17.88■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MORC3Q14149 939 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 COA1Q9GZY4 146 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 KIF1CO43896 1103 aaKnown RBP17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CASP14P31944 242 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 PLCD1P51178 756 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TUBB4BP68371 445 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TUBB2AQ13885 445 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 USP49Q70CQ1 688 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 KRI1Q8N9T8 703 aaKnown RBP17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RIN2Q8WYP3 895 aaPredicted RBP17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TUBB2BQ9BVA1 445 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NAA15Q9BXJ9 866 aaKnown RBP17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FUT2Q10981 343 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 WHAMMP3Q1A5X7 153 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SPTY2D1Q68D10 685 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RTFDC1Q9BY42 306 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SARSP49591 514 aaKnown RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 STX17P56962 302 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 KLHL10Q6JEL2 608 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NLGN2Q8NFZ4 835 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 GDAP1L1Q96MZ0 367 aa17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FOXP1Q9H334 677 aaPredicted RBP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
MAP1LC3B-201ENST00000268607 WNT7AO00755 349 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 APTXQ7Z2E3 356 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MTA3Q9BTC8 594 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RNF26Q9BY78 433 aaPredicted RBP17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 BCS1LQ9Y276 419 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NID2Q14112 1375 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MFAP3LO75121 409 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 PRPF6O94906 941 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 NT5DC1Q5TFE4 455 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TMC4Q7Z404 712 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SRBD1Q8N5C6 995 aaKnown RBP17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ATP8A2Q9NTI2 1148 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SCN9AQ15858 1988 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FGRP09769 529 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CCT5P48643 541 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FXR1P51114 621 aaKnown RBP eCLIP17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 RILPL1Q5EBL4 403 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 DAGLAQ9Y4D2 1042 aa17.85■□□□□ 0.45
MAP1LC3B-201ENST00000268607 ADAMTS3O15072 1205 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 POLD1P28340 1107 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FBXO2Q9UK22 296 aaPredicted RBP17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TFAP4Q01664 338 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TCP10Q12799 353 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 TEX11Q8IYF3 940 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CNPY4Q8N129 248 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 FAM169AQ9Y6X4 670 aa17.84■□□□□ 0.45
MAP1LC3B-201ENST00000268607 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CTCFLQ8NI51 663 aaPredicted RBP17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RABEP2Q9H5N1 569 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 HPCAL4Q9UM19 191 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP17L3A6NCW0 530 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP17L4A6NCW7 530 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GYPCP04921 128 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PBX1P40424 430 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 AARSP49588 968 aaKnown RBP eCLIP17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ERVK-24P63145 666 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP17L1Q7RTZ2 530 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 EYA3Q99504 573 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 FAM107BQ9H098 131 aa17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ADD3Q9UEY8 706 aaKnown RBP17.83■□□□□ 0.44
MAP1LC3B-201ENST00000268607 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PRPF3O43395 683 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms