RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 PLCD1P51178 756 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 DEFB103AP81534 67 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 MRPL38Q96DV4 380 aaKnown RBP17.62■□□□□ 0.41
RABEPK-201ENST00000259460 FGD4Q96M96 766 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 CRBNQ96SW2 442 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 CLDND1Q9NY35 253 aa17.62■□□□□ 0.41
RABEPK-201ENST00000259460 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
RABEPK-201ENST00000259460 SMAD2Q15796 467 aaKnown RBP17.61■□□□□ 0.41
RABEPK-201ENST00000259460 CLUL1Q15846 466 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 TCEAL5Q5H9L2 206 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 SNRNP48Q6IEG0 339 aaKnown RBP17.61■□□□□ 0.41
RABEPK-201ENST00000259460 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 AP5M1Q9H0R1 490 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 SH2D4AQ9H788 454 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 BAHCC1Q9P281 2608 aa17.61■□□□□ 0.41
RABEPK-201ENST00000259460 KDM4AO75164 1064 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 IQCF3P0C7M6 154 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 UQCRFS1P1P0C7P4 283 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 PTPROQ16827 1216 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 CCDC144CPQ8IYA2 1237 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 BANK1Q8NDB2 785 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.6■□□□□ 0.41
RABEPK-201ENST00000259460 C17orf80Q9BSJ5 609 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 TEX13BQ9BXU2 312 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 GNEQ9Y223 722 aaKnown RBP17.6■□□□□ 0.41
RABEPK-201ENST00000259460 ATG2AQ2TAZ0 1938 aa17.6■□□□□ 0.41
RABEPK-201ENST00000259460 PTPRCP08575 1304 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 ICA1Q05084 483 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 TMEM179Q6ZVK1 233 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
RABEPK-201ENST00000259460 RETREG2Q8NC44 543 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
RABEPK-201ENST00000259460 RAD9AQ99638 391 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 TMX2Q9Y320 296 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 DMXL1Q9Y485 3027 aa17.59■□□□□ 0.41
RABEPK-201ENST00000259460 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 DYNC1LI2O43237 492 aaPredicted RBP17.58■□□□□ 0.4
RABEPK-201ENST00000259460 GJB5O95377 273 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 CYP7A1P22680 504 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 EVX2Q03828 476 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 RPAINQ86UA6 219 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 CNTNAP3BQ96NU0 1288 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 CNTNAP3Q9BZ76 1288 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.4
RABEPK-201ENST00000259460 STXBP3O00186 592 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 MBTPS2O43462 519 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
RABEPK-201ENST00000259460 AVPR2P30518 371 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 ZXDAP98168 799 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 GABPAQ06546 454 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 COL19A1Q14993 1142 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 FAM47CQ5HY64 1035 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 FAM117BQ6P1L5 589 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 DNAH14Q0VDD8 3507 aa17.57■□□□□ 0.4
RABEPK-201ENST00000259460 CYP2E1P05181 493 aaPredicted RBP17.56■□□□□ 0.4
RABEPK-201ENST00000259460 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
RABEPK-201ENST00000259460 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
RABEPK-201ENST00000259460 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
RABEPK-201ENST00000259460 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
RABEPK-201ENST00000259460 NSUN3Q9H649 340 aaKnown RBP17.56■□□□□ 0.4
RABEPK-201ENST00000259460 SMC4Q9NTJ3 1288 aa17.56■□□□□ 0.4
RABEPK-201ENST00000259460 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
RABEPK-201ENST00000259460 NCOR2Q9Y618 2525 aa17.56■□□□□ 0.4
RABEPK-201ENST00000259460 RAD21O60216 631 aa17.55■□□□□ 0.4
RABEPK-201ENST00000259460 SMPD1P17405 629 aa17.55■□□□□ 0.4
RABEPK-201ENST00000259460 NBL1P41271 181 aa17.55■□□□□ 0.4
RABEPK-201ENST00000259460 ADSSL1Q8N142 457 aa17.55■□□□□ 0.4
RABEPK-201ENST00000259460 PPP1R13LQ8WUF5 828 aa17.55■□□□□ 0.4
RABEPK-201ENST00000259460 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
RABEPK-201ENST00000259460 LTBRP36941 435 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 BFSP2Q13515 415 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 FAM83BQ5T0W9 1011 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 DGLUCYQ7Z3D6 616 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 CERS3Q8IU89 383 aa17.54■□□□□ 0.4
RABEPK-201ENST00000259460 TRIP12Q14669 1992 aaPredicted RBP17.54■□□□□ 0.4
RABEPK-201ENST00000259460 AKR1B1P15121 316 aa17.53■□□□□ 0.4
RABEPK-201ENST00000259460 SIGLEC14Q08ET2 396 aa17.53■□□□□ 0.4
RABEPK-201ENST00000259460 SMAD4Q13485 552 aaKnown RBP17.53■□□□□ 0.4
RABEPK-201ENST00000259460 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
RABEPK-201ENST00000259460 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
RABEPK-201ENST00000259460 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
RABEPK-201ENST00000259460 GALR2O43603 387 aaPredicted RBP17.52■□□□□ 0.4
RABEPK-201ENST00000259460 DLX2Q07687 328 aaPredicted RBP17.52■□□□□ 0.4
RABEPK-201ENST00000259460 TMEM63BQ5T3F8 832 aa17.52■□□□□ 0.4
RABEPK-201ENST00000259460 CNKSR3Q6P9H4 555 aa17.52■□□□□ 0.4
RABEPK-201ENST00000259460 CPXCR1Q8N123 301 aa17.52■□□□□ 0.4
RABEPK-201ENST00000259460 NKD2Q969F2 451 aaPredicted RBP17.52■□□□□ 0.4
RABEPK-201ENST00000259460 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
RABEPK-201ENST00000259460 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
RABEPK-201ENST00000259460 MYL3P08590 195 aa17.51■□□□□ 0.39
RABEPK-201ENST00000259460 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms