RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
DDX39A-201ENST00000242776 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 LRRC37A2A6NM11 1700 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 SOWAHBA6NEL2 793 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 ATP2A1O14983 1001 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 B4GALT4O60513 344 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 APPP05067 770 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
DDX39A-201ENST00000242776 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-201ENST00000242776 SLC4A7Q9Y6M7 1214 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 GRIN2DO15399 1336 aa16.43■□□□□ 0.22
DDX39A-201ENST00000242776 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 SMPD1P17405 629 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 TDO2P48775 406 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 ERICH6BQ5W0A0 696 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 DEFB128Q7Z7B8 93 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 NOC4LQ9BVI4 516 aaKnown RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 BMP3P12645 472 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 ALAS1P13196 640 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 PLA2G5P39877 138 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 KRT40Q6A162 431 aa16.42■□□□□ 0.22
DDX39A-201ENST00000242776 PURBQ96QR8 312 aaKnown RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 GNEQ9Y223 722 aaKnown RBP16.42■□□□□ 0.22
DDX39A-201ENST00000242776 IGKV6D-41A0A0C4DH26 115 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 CYP2C9P11712 490 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 TSHZ3Q63HK5 1081 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 SLC43A3Q8NBI5 491 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 MTMR4Q9NYA4 1195 aa16.41■□□□□ 0.22
DDX39A-201ENST00000242776 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 LCTP09848 1927 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 XIRP2A4UGR9 3374 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 ZEB2O60315 1214 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 TTLL1O95922 423 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 BMP1P13497 986 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
DDX39A-201ENST00000242776 MUM1L1Q5H9M0 696 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
DDX39A-201ENST00000242776 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
DDX39A-201ENST00000242776 TRMT13Q9NUP7 481 aaKnown RBP16.4■□□□□ 0.22
DDX39A-201ENST00000242776 ASB14A6NK59 587 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 M0R2C6 588 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 CABYRO75952 493 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 CA3P07451 260 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 TSPY3P0CV98 308 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 TSPY8P0CW00 308 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 STAT2P52630 851 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 OAZ1P54368 228 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 KCTD1Q719H9 257 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 PCDHA11Q9Y5I1 949 aa16.39■□□□□ 0.21
DDX39A-201ENST00000242776 GPAA1O43292 621 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 MYL3P08590 195 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 MCCP23508 829 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 NSMFQ6X4W1 530 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX39A-201ENST00000242776 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 MKL1Q969V6 931 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 ZNF536O15090 1300 aa16.38■□□□□ 0.21
DDX39A-201ENST00000242776 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 NKX3-2P78367 333 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 TFAP4Q01664 338 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 ARNTL2Q8WYA1 636 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 APPBP2Q92624 585 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-201ENST00000242776 EPHX3Q9H6B9 360 aa16.37■□□□□ 0.21
DDX39A-201ENST00000242776 RBAK-RBAKDNI3L0D1 243 aa16.36■□□□□ 0.21
DDX39A-201ENST00000242776 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
DDX39A-201ENST00000242776 SLC1A4P43007 532 aa16.36■□□□□ 0.21
DDX39A-201ENST00000242776 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
DDX39A-201ENST00000242776 MTCH2Q9Y6C9 303 aa16.36■□□□□ 0.21
DDX39A-201ENST00000242776 TRIP12Q14669 1992 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms