RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 NTRK3Q16288 839 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 GPATCH4Q5T3I0 446 aaKnown RBP11.82□□□□□ -0.52
PHGDH-224ENST00000641711 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
PHGDH-224ENST00000641711 CATSPERGQ6ZRH7 1159 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
PHGDH-224ENST00000641711 BRAPQ7Z569 592 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 FAM160B2Q86V87 743 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 TMEM47Q9BQJ4 181 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
PHGDH-224ENST00000641711 MGAMO43451 1857 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 NMT2O60551 498 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 HSPA1AP0DMV8 641 aaKnown RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 HSPA1BP0DMV9 641 aaKnown RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 LIG1P18858 919 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 SLC1A4P43007 532 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 CRHR2Q13324 411 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 WTAPQ15007 396 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 TREML2Q5T2D2 321 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 SLFN13Q68D06 897 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 FAM217BQ9NTX9 383 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-224ENST00000641711 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 RTEL1Q9NZ71 1219 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 SLC12A7Q9Y666 1083 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 MYH15Q9Y2K3 1946 aa11.81□□□□□ -0.52
PHGDH-224ENST00000641711 MYH6P13533 1939 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 GOLGA8AA7E2F4 631 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 TRPA1O75762 1119 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 DDAH1O94760 285 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 BMP3P12645 472 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 IFNAR1P17181 557 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 CDC27P30260 824 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 COG2Q14746 738 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 ARHGEF6Q15052 776 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
PHGDH-224ENST00000641711 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
PHGDH-224ENST00000641711 COL11A1P12107 1806 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-224ENST00000641711 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-224ENST00000641711 FLOT1O75955 427 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 YEATS4O95619 227 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 CALM1P0DP23 149 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 CALM2P0DP24 149 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 CALM3P0DP25 149 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 PDHBP11177 359 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 BCRP11274 1271 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 DSG3P32926 999 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 COPB2P35606 906 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 STAT2P52630 851 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 HERVK_113P62684 666 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 C17orf99Q6UX52 265 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
PHGDH-224ENST00000641711 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 ALG1Q9BT22 464 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 PPP1R9AQ9ULJ8 1098 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 RABGAP1Q9Y3P9 1069 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
PHGDH-224ENST00000641711 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 GPR25O00155 361 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 CTAGE5O15320 804 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-224ENST00000641711 GNRH1P01148 92 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 CCDC192P0DO97 292 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
PHGDH-224ENST00000641711 FOSBP53539 338 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 OAZ1P54368 228 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 CCNA1P78396 465 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 RTN1Q16799 776 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
PHGDH-224ENST00000641711 MYSM1Q5VVJ2 828 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms