RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 USH1GQ495M9 461 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 KIAA1755Q5JYT7 1200 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 CPXCR1Q8N123 301 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
PHGDH-220ENST00000641570 CUL5Q93034 780 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 ATG4CQ96DT6 458 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 ALG1Q9BT22 464 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 CPVLQ9H3G5 476 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 FBXO28Q9NVF7 368 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 FAM155AB1AL88 458 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 VWA5AO00534 786 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 AOC2O75106 756 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 VEGFBP49765 207 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 FOSBP53539 338 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 OAZ1P54368 228 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 CUL4AQ13619 759 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 QRICH1Q2TAL8 776 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 PPP1R18Q6NYC8 613 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 C8orf76Q96K31 380 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 IPO9Q96P70 1041 aaKnown RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 JMJD4Q9H9V9 463 aa14.93□□□□□ -0.02
PHGDH-220ENST00000641570 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
PHGDH-220ENST00000641570 ABCB11O95342 1321 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 SPDYE16A6NNV3 312 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-220ENST00000641570 JAK2O60674 1132 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 ICAM1P05362 532 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 CYP2C8P10632 490 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 CALML3P27482 149 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 NLRP5P59047 1200 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-220ENST00000641570 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 SNRNP48Q6IEG0 339 aaKnown RBP14.92□□□□□ -0.02
PHGDH-220ENST00000641570 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
PHGDH-220ENST00000641570 SLC38A10Q9HBR0 1119 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 RAVER2Q9HCJ3 691 aaKnown RBP14.92□□□□□ -0.02
PHGDH-220ENST00000641570 C6orf50Q9HD87 102 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 RABGAP1Q9Y3P9 1069 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 PCDHA1Q9Y5I3 950 aa14.92□□□□□ -0.02
PHGDH-220ENST00000641570 SLC25A27O95847 323 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 ALAS1P13196 640 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 GNA11P29992 359 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 STAT3P40763 770 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 TM4SF4P48230 202 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 SNAP25P60880 206 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 HTRA3P83110 453 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 MAP2K1Q02750 393 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-220ENST00000641570 KIF22Q14807 665 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 LARP1BQ659C4 914 aaKnown RBP14.91□□□□□ -0.02
PHGDH-220ENST00000641570 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-220ENST00000641570 GPRC5AQ8NFJ5 357 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 EHMT1Q9H9B1 1298 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 HOMER2Q9NSB8 354 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-220ENST00000641570 FBXO40Q9UH90 709 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 IVNS1ABPQ9Y6Y0 642 aa14.91□□□□□ -0.02
PHGDH-220ENST00000641570 VPS37CA5D8V6 355 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-220ENST00000641570 IGF2BP3O00425 579 aaKnown RBP eCLIP14.9□□□□□ -0.02
PHGDH-220ENST00000641570 ADCY7P51828 1080 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 NTRK3Q16288 839 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 ANKRD13CQ8N6S4 541 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 SMARCC2Q8TAQ2 1214 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 GPKOWQ92917 476 aaPredicted RBP eCLIP14.9□□□□□ -0.02
PHGDH-220ENST00000641570 SH3GLB2Q9NR46 395 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 LOC285556D6RIA3 1793 aa14.9□□□□□ -0.02
PHGDH-220ENST00000641570 CYTH3O43739 400 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 MRPL12P52815 198 aaKnown RBP14.89□□□□□ -0.03
PHGDH-220ENST00000641570 MOGSQ13724 837 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 LBX2Q6XYB7 198 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 MPHOSPH6Q99547 160 aaKnown RBP14.89□□□□□ -0.03
PHGDH-220ENST00000641570 SPATC1LQ9H0A9 340 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 ACAD9Q9H845 621 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 BARHL2Q9NY43 387 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 PHIPQ8WWQ0 1821 aa14.89□□□□□ -0.03
PHGDH-220ENST00000641570 CA12O43570 354 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 ERVK-9P63128 1117 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 ERVK-24P63145 666 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 ARHGEF6Q15052 776 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 FAM110CQ1W6H9 321 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 GALNT17Q6IS24 598 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
PHGDH-220ENST00000641570 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms