RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 AGBL1Q96MI9 1066 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 GUCD1Q96NT3 240 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 RNF146Q9NTX7 359 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 STXBP5LQ9Y2K9 1186 aa19.82■□□□□ 0.76
PHGDH-213ENST00000641272 DDX49Q9Y6V7 483 aaKnown RBP19.82■□□□□ 0.76
PHGDH-213ENST00000641272 ACVR2BQ13705 512 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 C1orf53Q5VUE5 145 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 MAMDC4Q6UXC1 1216 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 MSL3Q8N5Y2 521 aaKnown RBP19.81■□□□□ 0.76
PHGDH-213ENST00000641272 CHST13Q8NET6 341 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 FAM227BQ96M60 508 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 ACAD9Q9H845 621 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 FBXO40Q9UH90 709 aa19.81■□□□□ 0.76
PHGDH-213ENST00000641272 ZNF536O15090 1300 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 A0A0D9SFI3 127 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
PHGDH-213ENST00000641272 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
PHGDH-213ENST00000641272 ALAS1P13196 640 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 OAZ1P54368 228 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 EPHB4P54760 987 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 KCNA10Q16322 511 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 CCDC96Q2M329 555 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.8■□□□□ 0.76
PHGDH-213ENST00000641272 ZNF467Q7Z7K2 595 aaPredicted RBP19.8■□□□□ 0.76
PHGDH-213ENST00000641272 CCDC144CPQ8IYA2 1237 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 GMCL1Q96IK5 515 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 A1CFQ9NQ94 594 aaKnown RBP19.8■□□□□ 0.76
PHGDH-213ENST00000641272 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 TOMM22Q9NS69 142 aa19.8■□□□□ 0.76
PHGDH-213ENST00000641272 POTEB2H3BUK9 544 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 RAG1P15918 1043 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 PTGS1P23219 599 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 PDE1AP54750 535 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 CCDC144BQ3MJ40 725 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 RRP12Q5JTH9 1297 aaKnown RBP19.79■□□□□ 0.76
PHGDH-213ENST00000641272 FAM160B2Q86V87 743 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 KLHDC9Q8NEP7 349 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 STAG1Q8WVM7 1258 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 EVI5LQ96CN4 794 aa19.79■□□□□ 0.76
PHGDH-213ENST00000641272 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.78■□□□□ 0.76
PHGDH-213ENST00000641272 DLL1O00548 723 aa19.78■□□□□ 0.76
PHGDH-213ENST00000641272 DUSP11O75319 330 aaKnown RBP19.78■□□□□ 0.76
PHGDH-213ENST00000641272 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
PHGDH-213ENST00000641272 TMEM39AQ9NV64 488 aa19.78■□□□□ 0.76
PHGDH-213ENST00000641272 PRR12Q9ULL5 1215 aa19.78■□□□□ 0.76
PHGDH-213ENST00000641272 LAMA2P24043 3122 aaKnown RBP19.78■□□□□ 0.76
PHGDH-213ENST00000641272 MOXD2PA6NHM9 499 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 BEX3Q00994 111 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 MUM1L1Q5H9M0 696 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 CCSAPQ6IQ19 270 aaPredicted RBP19.77■□□□□ 0.76
PHGDH-213ENST00000641272 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.76
PHGDH-213ENST00000641272 FAM133AQ8N9E0 248 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 CHURC1Q8WUH1 139 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 NUP133Q8WUM0 1156 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 RNPC3Q96LT9 517 aaKnown RBP19.77■□□□□ 0.76
PHGDH-213ENST00000641272 TRERF1Q96PN7 1200 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 TSEN34Q9BSV6 310 aaKnown RBP19.77■□□□□ 0.76
PHGDH-213ENST00000641272 LNPKQ9C0E8 428 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 KATNBL1Q9H079 304 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 ABHD16BQ9H3Z7 469 aa19.77■□□□□ 0.76
PHGDH-213ENST00000641272 ASTN1O14525 1302 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 FRMPD2Q68DX3 1309 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-213ENST00000641272 LAMA4Q16363 1823 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 SOWAHBA6NEL2 793 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 KIAA0355O15063 1070 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 ASGR1P07306 291 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 CST5P28325 142 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-213ENST00000641272 HAND2P61296 217 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 FPGSQ05932 587 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 FAAP100Q0VG06 881 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 NMIQ13287 307 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-213ENST00000641272 NOL8Q76FK4 1167 aaKnown RBP19.76■□□□□ 0.75
PHGDH-213ENST00000641272 GLT1D1Q96MS3 346 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 CCPG1Q9ULG6 757 aa19.76■□□□□ 0.75
PHGDH-213ENST00000641272 DCDC2CA8MYV0 355 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 SLC16A2P36021 539 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 TTBK2Q6IQ55 1244 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 RCSD1Q6JBY9 416 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 NSMFQ6X4W1 530 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 EEPD1Q7L9B9 569 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 FBXO16Q8IX29 292 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-213ENST00000641272 VTI1AQ96AJ9 217 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 PURBQ96QR8 312 aaKnown RBP19.75■□□□□ 0.75
PHGDH-213ENST00000641272 UPF3AQ9H1J1 476 aaKnown RBP19.75■□□□□ 0.75
PHGDH-213ENST00000641272 SPC25Q9HBM1 224 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 HELLSQ9NRZ9 838 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 ANAPC4Q9UJX5 808 aa19.75■□□□□ 0.75
PHGDH-213ENST00000641272 TRIM6-TRIM34B2RNG4 842 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 ORC4O43929 436 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 FDX1P10109 184 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 GJA9P57773 515 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-213ENST00000641272 GNASQ5JWF2 1037 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 FAM109BQ6ICB4 259 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-213ENST00000641272 ANKRD33Q7Z3H0 272 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 GPCPD1Q9NPB8 672 aa19.74■□□□□ 0.75
PHGDH-213ENST00000641272 A0A0U1RQG5 324 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms