RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
HLA-C-210ENST00000640219 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
HLA-C-210ENST00000640219 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
HLA-C-210ENST00000640219 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
HLA-C-210ENST00000640219 TRANK1O15050 2925 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 CHGBP05060 677 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 ATP2A2P16615 1042 aaKnown RBP16.47■□□□□ 0.23
HLA-C-210ENST00000640219 GJA9P57773 515 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 HSP90AB4PQ58FF6 505 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 KRT40Q6A162 431 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 MAMDC4Q6UXC1 1216 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
HLA-C-210ENST00000640219 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
HLA-C-210ENST00000640219 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
HLA-C-210ENST00000640219 CERS4Q9HA82 394 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
HLA-C-210ENST00000640219 MYH7P12883 1935 aa16.47■□□□□ 0.23
HLA-C-210ENST00000640219 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 VWA5AO00534 786 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 ADCY6O43306 1168 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
HLA-C-210ENST00000640219 EVX2Q03828 476 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 CD320Q9NPF0 282 aa16.46■□□□□ 0.23
HLA-C-210ENST00000640219 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
HLA-C-210ENST00000640219 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
HLA-C-210ENST00000640219 CA3P07451 260 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 ICA1Q05084 483 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 CCDC144BQ3MJ40 725 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 NOC4LQ9BVI4 516 aaKnown RBP16.45■□□□□ 0.22
HLA-C-210ENST00000640219 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
HLA-C-210ENST00000640219 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
HLA-C-210ENST00000640219 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
HLA-C-210ENST00000640219 EPOPA6NHQ4 379 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 GOLIM4O00461 696 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
HLA-C-210ENST00000640219 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
HLA-C-210ENST00000640219 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 WNT8AQ9H1J5 351 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 ABHD16BQ9H3Z7 469 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 PPP1R9AQ9ULJ8 1098 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 PARP14Q460N5 1801 aa16.44■□□□□ 0.22
HLA-C-210ENST00000640219 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 CTAGE5O15320 804 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 BEX3Q00994 111 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
HLA-C-210ENST00000640219 REPS2Q8NFH8 660 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 ARNTL2Q8WYA1 636 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 UIMC1Q96RL1 719 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 NAV1Q8NEY1 1877 aa16.43■□□□□ 0.22
HLA-C-210ENST00000640219 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 AKR1B1P15121 316 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 NHLH1Q02575 133 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 ITGA7Q13683 1181 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 TTLL4Q14679 1199 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 TMED8Q6PL24 325 aaPredicted RBP16.42■□□□□ 0.22
HLA-C-210ENST00000640219 VWCEQ96DN2 955 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 SCLYQ96I15 445 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 IPO9Q96P70 1041 aaKnown RBP16.42■□□□□ 0.22
HLA-C-210ENST00000640219 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
HLA-C-210ENST00000640219 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 SWAP70Q9UH65 585 aa16.42■□□□□ 0.22
HLA-C-210ENST00000640219 CABYRO75952 493 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 CYP2D6P10635 497 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 NKX3-2P78367 333 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 TAP1Q03518 808 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
HLA-C-210ENST00000640219 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
HLA-C-210ENST00000640219 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
HLA-C-210ENST00000640219 RAD21O60216 631 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 B4GALT4O60513 344 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 PFKMP08237 780 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 GRB10Q13322 594 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
HLA-C-210ENST00000640219 CENPQQ7L2Z9 268 aaPredicted RBP16.4■□□□□ 0.22
HLA-C-210ENST00000640219 AGBL1Q96MI9 1066 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
HLA-C-210ENST00000640219 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
HLA-C-210ENST00000640219 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
HLA-C-210ENST00000640219 PDE6AP16499 860 aa16.39■□□□□ 0.21
HLA-C-210ENST00000640219 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
HLA-C-210ENST00000640219 ARMCX2Q7L311 632 aa16.39■□□□□ 0.21
HLA-C-210ENST00000640219 GJD3Q8N144 294 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms