RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 KCNQ4P56696 695 aa7.61□□□□□ -1.19
RTTN-215ENST00000639487 NPY5RQ15761 445 aa7.61□□□□□ -1.19
RTTN-215ENST00000639487 TBC1D9Q6ZT07 1266 aa7.61□□□□□ -1.19
RTTN-215ENST00000639487 CRIPAKQ8N1N5 446 aa7.61□□□□□ -1.19
RTTN-215ENST00000639487 SPDYE16A6NNV3 312 aaPredicted RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 MAPK13O15264 365 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 DDNO94850 711 aaPredicted RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 BRD1O95696 1058 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 FGAP02671 866 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 MNX1P50219 401 aaPredicted RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 PAK2Q13177 524 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 ANGEL2Q5VTE6 544 aaKnown RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 BRI3BPQ8WY22 251 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 PHF20Q9BVI0 1012 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 FOXP1Q9H334 677 aaPredicted RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 ZFYVE28Q9HCC9 887 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 PTPN22Q9Y2R2 807 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 E7EWF7 191 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 CXCL10P02778 98 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 CYP7A1P22680 504 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 YY1P25490 414 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 MCM5P33992 734 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 GPR162Q16538 588 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 FAM187BQ17R55 369 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 CREB3L3Q68CJ9 461 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 BICD2Q8TD16 824 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 HVCN1Q96D96 273 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 PYM1Q9BRP8 204 aaKnown RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 RNF186Q9NXI6 227 aa7.6□□□□□ -1.19
RTTN-215ENST00000639487 GNEQ9Y223 722 aaKnown RBP7.6□□□□□ -1.19
RTTN-215ENST00000639487 CTAGE5O15320 804 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 HOXD10P28358 340 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 HOXA13P31271 388 aaPredicted RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 ARL6IP4Q66PJ3 421 aaKnown RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 PRPF38AQ8NAV1 312 aaKnown RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 SNX14Q9Y5W7 946 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 CXorf51AA0A1B0GTR3 108 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 CCNA1P78396 465 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 HMGN5P82970 282 aaKnown RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 PPP2R5CQ13362 524 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 ABCB5Q2M3G0 1257 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 RBM26Q5T8P6 1007 aaKnown RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 SLC9C2Q5TAH2 1124 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 CCDC62Q6P9F0 684 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 PLPPR4Q7Z2D5 763 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 SLC17A8Q8NDX2 589 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 CDHR1Q96JP9 859 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 BARHL2Q9NY43 387 aa7.59□□□□□ -1.19
RTTN-215ENST00000639487 ANGEL1Q9UNK9 670 aaKnown RBP7.59□□□□□ -1.19
RTTN-215ENST00000639487 IGKV6-21A0A0C4DH24 114 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 VWA5AO00534 786 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 CDKL5O76039 1030 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 KIF5BP33176 963 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 TOB2Q14106 344 aaPredicted RBP7.59□□□□□ -1.2
RTTN-215ENST00000639487 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 CTU1Q7Z7A3 348 aaKnown RBP7.59□□□□□ -1.2
RTTN-215ENST00000639487 TBC1D10CQ8IV04 446 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 CCDC12Q8WUD4 166 aaPredicted RBP7.59□□□□□ -1.2
RTTN-215ENST00000639487 INPP4AQ96PE3 977 aaPredicted RBP7.59□□□□□ -1.2
RTTN-215ENST00000639487 CSRNP1Q96S65 589 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 SLC5A4Q9NY91 659 aa7.59□□□□□ -1.2
RTTN-215ENST00000639487 ZBTB12Q9Y330 459 aaPredicted RBP7.59□□□□□ -1.2
RTTN-215ENST00000639487 ASB14A6NK59 587 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 VGLL3A8MV65 326 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 CYP21A2P08686 494 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 GRM1Q13255 1194 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 DEFB115Q30KQ5 88 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 NBPF9Q3BBW0 867 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 SP7Q8TDD2 431 aaPredicted RBP7.58□□□□□ -1.2
RTTN-215ENST00000639487 SLF1Q9BQI6 1058 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 LMCD1Q9NZU5 365 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 NEDD4P46934 1319 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 MBLAC1A4D2B0 266 aaPredicted RBP7.58□□□□□ -1.2
RTTN-215ENST00000639487 PIGRP01833 764 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 FXR2P51116 673 aaKnown RBP eCLIP7.58□□□□□ -1.2
RTTN-215ENST00000639487 TIMM10P62072 90 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 COG2Q14746 738 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 SEPT2Q15019 361 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 NAALADL2Q58DX5 795 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 KRT26Q7Z3Y9 468 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 CCDC51Q96ER9 411 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 PTPN18Q99952 460 aa7.58□□□□□ -1.2
RTTN-215ENST00000639487 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
RTTN-215ENST00000639487 MYO16Q9Y6X6 1858 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 FRMD3A2A2Y4 597 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 C6orf229H3BNL8 230 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 OPLAHO14841 1288 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 CLGNO14967 610 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 KIAA0355O15063 1070 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 FKTNO75072 461 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MBD4O95243 580 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 CD4P01730 458 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 LACTBP83111 547 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 NEUROD2Q15784 382 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms