RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 DNAJC7Q99615 494 aa21.56■■□□□ 1.04
PTBP1-220ENST00000627714 A0A0U1RQJ8 604 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 STXBP3O00186 592 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 RPS6KA4O75676 772 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 PPP4CP60510 307 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
PTBP1-220ENST00000627714 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 ANKZF1Q9H8Y5 726 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 LUC7L2Q9Y383 392 aaKnown RBP21.55■■□□□ 1.04
PTBP1-220ENST00000627714 EPN1Q9Y6I3 576 aaPredicted RBP21.55■■□□□ 1.04
PTBP1-220ENST00000627714 NAV1Q8NEY1 1877 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 KLRC4O43908 158 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 ZPR1O75312 459 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 NDUFA10O95299 355 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 CDC25AP30304 524 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 DNM2P50570 870 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 TYW1BQ6NUM6 668 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 HAUS4Q9H6D7 363 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 PUF60Q9UHX1 559 aaKnown RBP21.55■■□□□ 1.04
PTBP1-220ENST00000627714 CAPN11Q9UMQ6 739 aa21.55■■□□□ 1.04
PTBP1-220ENST00000627714 KDM4FA0A1W2PPD8 638 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 CTAGE15A4D2H0 777 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 PALM3A6NDB9 673 aaPredicted RBP21.54■■□□□ 1.04
PTBP1-220ENST00000627714 LDHCP07864 332 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 CTAGE8P0CG41 777 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 OAS2P29728 719 aaKnown RBP21.54■■□□□ 1.04
PTBP1-220ENST00000627714 HEATR3Q7Z4Q2 680 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 CTAGE6Q86UF2 777 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 CTAGE4Q8IX94 777 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 ZNF507Q8TCN5 953 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 RASGRP4Q8TDF6 673 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 TRIM47Q96LD4 638 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 GBP3Q9H0R5 595 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 MAPK8IP1Q9UQF2 711 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 LEMD3Q9Y2U8 911 aa21.54■■□□□ 1.04
PTBP1-220ENST00000627714 BICDL2A1A5D9 508 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 RNF225M0QZC1 329 aaPredicted RBP21.53■■□□□ 1.04
PTBP1-220ENST00000627714 MAP2K7O14733 419 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 GPS2Q13227 327 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 INF2Q27J81 1249 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 ZNF662Q6ZS27 426 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 KRT25Q7Z3Z0 450 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 RETREG2Q8NC44 543 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 SPZ1Q9BXG8 430 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 TMEM60Q9H2L4 133 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.53■■□□□ 1.04
PTBP1-220ENST00000627714 ORC2Q13416 577 aaPredicted RBP21.53■■□□□ 1.04
PTBP1-220ENST00000627714 TXNRD3Q86VQ6 643 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 FAM114A1Q8IWE2 563 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 SH3RF3Q8TEJ3 882 aaPredicted RBP21.53■■□□□ 1.04
PTBP1-220ENST00000627714 SLF1Q9BQI6 1058 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 NUP58Q9BVL2 599 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 ZMYND12Q9H0C1 365 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 ZSWIM4Q9H7M6 989 aa21.53■■□□□ 1.04
PTBP1-220ENST00000627714 MYH1P12882 1939 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 TM4SF1P30408 202 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 DYNLL2Q96FJ2 89 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 TRIM49BA6NDI0 452 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 CYTH3O43739 400 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 TTI2Q6NXR4 508 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 HDXQ7Z353 690 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 EHBP1Q8NDI1 1231 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 CALCOCO1Q9P1Z2 691 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 MYO6Q9UM54 1294 aa21.52■■□□□ 1.04
PTBP1-220ENST00000627714 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 PSMD14O00487 310 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 POLR3GO15318 223 aaPredicted RBP21.51■■□□□ 1.03
PTBP1-220ENST00000627714 OR52Z1P0C646 297 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 KRT83P78385 493 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 AMPD2Q01433 879 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 TMEM47Q9BQJ4 181 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 SBF2Q86WG5 1849 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 SRGNP10124 158 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 SMARCA1P28370 1054 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 GNA11P29992 359 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 MEA1Q16626 185 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 BEND6Q5SZJ8 279 aaPredicted RBP21.51■■□□□ 1.03
PTBP1-220ENST00000627714 CABP7Q86V35 215 aa21.51■■□□□ 1.03
PTBP1-220ENST00000627714 PP2D1A8MPX8 630 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
PTBP1-220ENST00000627714 PMS1P54277 932 aaKnown RBP21.5■■□□□ 1.03
PTBP1-220ENST00000627714 AMPD3Q01432 767 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 NONOQ15233 471 aaKnown RBP eCLIP21.5■■□□□ 1.032e-7■■■□□ 18.3
PTBP1-220ENST00000627714 SLC35G1Q2M3R5 365 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 TXLNBQ8N3L3 684 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 IQCDQ96DY2 449 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 CHP1Q99653 195 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 C6orf50Q9HD87 102 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 EXOC1Q9NV70 894 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 SRP68Q9UHB9 627 aaKnown RBP21.5■■□□□ 1.03
PTBP1-220ENST00000627714 STX8Q9UNK0 236 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 FLT1P17948 1338 aa21.5■■□□□ 1.03
PTBP1-220ENST00000627714 CCNE1P24864 410 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 SLC4A8Q2Y0W8 1093 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 COBLL1Q53SF7 1204 aa21.49■■□□□ 1.03
PTBP1-220ENST00000627714 C15orf52Q6ZUT6 534 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms