RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 C2CD5Q86YS7 1000 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 NSMCE1Q8WV22 266 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 KRT12Q99456 494 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 NHEJ1Q9H9Q4 299 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 COPRSQ9NQ92 184 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM207AQ9NSI2 230 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 STK38LQ9Y2H1 464 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 PRDM1O75626 825 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 AP1G2O75843 785 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM153BP0C7A2 387 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM153CQ494X1 144 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 ACCSLQ4AC99 568 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM153AQ9UHL3 310 aa10.86□□□□□ -0.67
TNFAIP3-210ENST00000620204 SH3TC1Q8TE82 1336 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 PSMD14O00487 310 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 SLC8A1P32418 973 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MDH1P40925 334 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 ZAP70P43403 619 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 CRYMQ14894 314 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 WASF1Q92558 559 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 CYFIP2Q96F07 1278 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 SELENOSQ9BQE4 189 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 PUS3Q9BZE2 481 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 TRIM31Q9BZY9 425 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 GCOM1H8Y6P7 765 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MYZAPP0CAP1 466 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 KLK7P49862 253 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 HERVK_113P62684 666 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 RTN1Q16799 776 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 TCP11X2Q5H9J9 407 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 ALS2CLQ60I27 953 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 FUKQ8N0W3 1084 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 SLC52A2Q9HAB3 445 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 FBXO2Q9UK22 296 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 A6NNZ2 444 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MCM7P33993 719 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 KCNB1Q14721 858 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 TUBB8Q3ZCM7 444 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MAEAQ7L5Y9 396 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 CCDC50Q8IVM0 306 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 MB21D2Q8IYB1 491 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 ARFGAP2Q8N6H7 521 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 SAAL1Q96ER3 474 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 SH3GL2Q99962 352 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 PLAAQ9Y263 795 aa10.85□□□□□ -0.67
TNFAIP3-210ENST00000620204 NRKQ7Z2Y5 1582 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 XBP1P17861 261 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 ADORA1P30542 326 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 TOB1P50616 345 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 DPYDQ12882 1025 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 GNPTABQ3T906 1256 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 ARMC3Q5W041 872 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 AENQ8WTP8 325 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAXDC2Q96IV6 333 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 RBM12Q9NTZ6 932 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 PLEKP08567 350 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 PAK2Q13177 524 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 TRIM14Q14142 442 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 EMBQ6PCB8 327 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 DCAF5Q96JK2 942 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 NAPBQ9H115 298 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 SLC4A4Q9Y6R1 1079 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 PXDNQ92626 1479 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 UBN2Q6ZU65 1347 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 BAZ2BQ9UIF8 2168 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 MAGEA1P43355 309 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 DDR1Q08345 913 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 CUL4BQ13620 913 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 CACNA2D4Q7Z3S7 1137 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 NOVA2Q9UNW9 492 aaKnown RBP10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 CAPN6Q9Y6Q1 641 aa10.84□□□□□ -0.67
TNFAIP3-210ENST00000620204 GMNCA6NCL1 334 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 MINDY4BA8MYZ0 360 aa10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 RANBP6O60518 1105 aaKnown RBP10.83□□□□□ -0.68
TNFAIP3-210ENST00000620204 VIMP08670 466 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms