RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 TAF1P21675 1872 aa19.61■□□□□ 0.73
DDX1-207ENST00000617198 CCDC194A0A1B0GVG4 234 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 LRRIQ3A6PVS8 624 aaPredicted RBP19.6■□□□□ 0.73
DDX1-207ENST00000617198 M0R2N6 131 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 ENC1O14682 589 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 USP14P54578 494 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 MEA1Q16626 185 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 PAPD7Q5XG87 772 aaKnown RBP19.6■□□□□ 0.73
DDX1-207ENST00000617198 EHBP1Q8NDI1 1231 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 CCSER1Q9C0I3 900 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 MED4Q9NPJ6 270 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 KBTBD4Q9NVX7 518 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 HDAC6Q9UBN7 1215 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 KIAA1551Q9HCM1 1747 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 PP2D1A8MPX8 630 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 ATP1A1P05023 1023 aaKnown RBP19.6■□□□□ 0.73
DDX1-207ENST00000617198 SRGNP10124 158 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 MCM3P25205 808 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 UBA7P41226 1012 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 TTI2Q6NXR4 508 aa19.6■□□□□ 0.73
DDX1-207ENST00000617198 TMED8Q6PL24 325 aaPredicted RBP19.6■□□□□ 0.73
DDX1-207ENST00000617198 KRT86O43790 486 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 KIAA1328Q86T90 577 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 ZBTB9Q96C00 473 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 TMEM60Q9H2L4 133 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 WNK3Q9BYP7 1800 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 B4DLN1 442 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 CYLC1P35663 651 aaPredicted RBP19.59■□□□□ 0.73
DDX1-207ENST00000617198 SLC20A2Q08357 652 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 TYW1BQ6NUM6 668 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 DHTKD1Q96HY7 919 aaPredicted RBP19.59■□□□□ 0.73
DDX1-207ENST00000617198 RPGRIP1Q96KN7 1286 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 TUBGCP2Q9BSJ2 902 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 NUP58Q9BVL2 599 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 VIPAS39Q9H9C1 493 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 EXOC1Q9NV70 894 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 TFR2Q9UP52 801 aa19.59■□□□□ 0.73
DDX1-207ENST00000617198 MAP9Q49MG5 647 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 DGKHQ86XP1 1220 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 STAG2Q8N3U4 1231 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 RETREG2Q8NC44 543 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 PNMA1Q8ND90 353 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 JAKMIP2Q96AA8 810 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 MMS19Q96T76 1030 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 TTYH3Q9C0H2 523 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 PCDHA6Q9UN73 950 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 PCDHA8Q9Y5H6 950 aa19.58■□□□□ 0.73
DDX1-207ENST00000617198 LAD1O00515 517 aa19.58■□□□□ 0.72
DDX1-207ENST00000617198 KLRK1P26718 216 aa19.58■□□□□ 0.72
DDX1-207ENST00000617198 CKAP4Q07065 602 aaKnown RBP19.58■□□□□ 0.72
DDX1-207ENST00000617198 CSGALNACT2Q8N6G5 542 aa19.58■□□□□ 0.72
DDX1-207ENST00000617198 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.72
DDX1-207ENST00000617198 ZNHIT6Q9NWK9 470 aaKnown RBP19.58■□□□□ 0.72
DDX1-207ENST00000617198 FEZ2Q9UHY8 353 aaPredicted RBP19.58■□□□□ 0.72
DDX1-207ENST00000617198 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
DDX1-207ENST00000617198 SRGAP2O75044 1071 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 IVLP07476 585 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 TRIM21P19474 475 aaKnown RBP19.57■□□□□ 0.72
DDX1-207ENST00000617198 PRDX5P30044 214 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 GNAQP50148 359 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 TFAP4Q01664 338 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 CLEC4GQ6UXB4 293 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 CCDC170Q8IYT3 715 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 DAGLBQ8NCG7 672 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 CELF1Q92879 486 aaKnown RBP19.57■□□□□ 0.72
DDX1-207ENST00000617198 PLIN2Q99541 437 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 DUSP9Q99956 384 aaKnown RBP19.57■□□□□ 0.72
DDX1-207ENST00000617198 AGPAT5Q9NUQ2 364 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 MCM9Q9NXL9 1143 aa19.57■□□□□ 0.72
DDX1-207ENST00000617198 TARSL2A2RTX5 802 aaKnown RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 RPS6KA5O75582 802 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 IPO7O95373 1038 aaKnown RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 PRPHP41219 470 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 GRM4Q14833 912 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 INF2Q27J81 1249 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 GALNT17Q6IS24 598 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 CUEDC2Q9H467 287 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 MAGEF1Q9HAY2 307 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 IL17RBQ9NRM6 502 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 CASZ1Q86V15 1759 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 EIF3CLB5ME19 914 aaKnown RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 PHACTR2O75167 634 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 AARSP49588 968 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■■□□□ 11.6
DDX1-207ENST00000617198 TBC1D8BQ0IIM8 1120 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 ANKS1AQ92625 1134 aa19.56■□□□□ 0.72
DDX1-207ENST00000617198 EIF3CQ99613 913 aaKnown RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 NHEJ1Q9H9Q4 299 aaPredicted RBP19.56■□□□□ 0.72
DDX1-207ENST00000617198 BICDL2A1A5D9 508 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 RASSF10A6NK89 507 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 CCNE1P24864 410 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 HIBADHP31937 336 aaKnown RBP19.55■□□□□ 0.72
DDX1-207ENST00000617198 NT5C2P49902 561 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 ZBED6P86452 979 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 P2RX5Q93086 422 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 MAD2L2Q9UI95 211 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 A0A0U1RQG5 324 aaPredicted RBP19.55■□□□□ 0.72
DDX1-207ENST00000617198 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 FAM114A1Q8IWE2 563 aa19.55■□□□□ 0.72
DDX1-207ENST00000617198 LRRC15Q8TF66 581 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms