RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 PPP1R12BO60237 982 aaPredicted RBP25.1■■□□□ 1.61
USF2-216ENST00000607959 SLC39A14Q15043 492 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 RILPL1Q5EBL4 403 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 MAP1SQ66K74 1059 aaPredicted RBP25.1■■□□□ 1.61
USF2-216ENST00000607959 PIK3AP1Q6ZUJ8 805 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 AFG3L2Q9Y4W6 797 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 TRIM75PA6NK02 468 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 WDR46O15213 610 aaKnown RBP25.1■■□□□ 1.61
USF2-216ENST00000607959 VCAM1P19320 739 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 PPP1R18Q6NYC8 613 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 AS3MTQ9HBK9 375 aa25.1■■□□□ 1.61
USF2-216ENST00000607959 CHURC1Q8WUH1 139 aa25.09■■□□□ 1.61
USF2-216ENST00000607959 C6orf50Q9HD87 102 aa25.09■■□□□ 1.61
USF2-216ENST00000607959 FEM1BQ9UK73 627 aa25.09■■□□□ 1.61
USF2-216ENST00000607959 PCDHA7Q9UN72 937 aa25.09■■□□□ 1.61
USF2-216ENST00000607959 PARP14Q460N5 1801 aa25.09■■□□□ 1.61
USF2-216ENST00000607959 TRAF5O00463 557 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 SPTLC2O15270 562 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 MBD3O95983 291 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 STK38Q15208 465 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 MAP3K11Q16584 847 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 KIFC2Q96AC6 838 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 CLMNQ96JQ2 1002 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 GZF1Q9H116 711 aaPredicted RBP25.08■■□□□ 1.61
USF2-216ENST00000607959 RANBP17Q9H2T7 1088 aaKnown RBP25.08■■□□□ 1.61
USF2-216ENST00000607959 CLEC11AQ9Y240 323 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 PCDHA1Q9Y5I3 950 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 PTPRFP10586 1907 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 RLFQ13129 1914 aa25.08■■□□□ 1.61
USF2-216ENST00000607959 ATP2B1P20020 1258 aa25.08■■□□□ 1.6
USF2-216ENST00000607959 USP14P54578 494 aa25.08■■□□□ 1.6
USF2-216ENST00000607959 FAM160B2Q86V87 743 aa25.08■■□□□ 1.6
USF2-216ENST00000607959 RIC8AQ9NPQ8 531 aa25.08■■□□□ 1.6
USF2-216ENST00000607959 TMEM63CQ9P1W3 806 aa25.08■■□□□ 1.6
USF2-216ENST00000607959 GNA11P29992 359 aa25.07■■□□□ 1.6
USF2-216ENST00000607959 HMGCS2P54868 508 aa25.07■■□□□ 1.6
USF2-216ENST00000607959 C12orf42Q96LP6 360 aa25.07■■□□□ 1.6
USF2-216ENST00000607959 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.07■■□□□ 1.6
USF2-216ENST00000607959 TMEM260Q9NX78 707 aa25.07■■□□□ 1.6
USF2-216ENST00000607959 LIG1P18858 919 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 IREB2P48200 963 aaKnown RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 ADCY7P51828 1080 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 AXDND1Q5T1B0 1012 aaPredicted RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 CAVIN1Q6NZI2 390 aaKnown RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 FBXO11Q86XK2 927 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 AMNQ9BXJ7 453 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 NMRK2Q9NPI5 230 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 BIN2Q9UBW5 565 aaPredicted RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 OPLAHO14841 1288 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 MARCKSP29966 332 aaPredicted RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 KCNG4Q8TDN1 519 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 RPAP3Q9H6T3 665 aaPredicted RBP25.06■■□□□ 1.6
USF2-216ENST00000607959 MRVI1Q9Y6F6 885 aa25.06■■□□□ 1.6
USF2-216ENST00000607959 CLK2P49760 499 aaKnown RBP25.05■■□□□ 1.6
USF2-216ENST00000607959 EDIL3O43854 480 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 NF2P35240 595 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 ME1P48163 572 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 UBE2SQ16763 222 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 USH1GQ495M9 461 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 JAKMIP3Q5VZ66 844 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 ELP3Q9H9T3 547 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.04■■□□□ 1.6
USF2-216ENST00000607959 CSADQ9Y600 493 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 C19orf81C9J6K1 198 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 TRAPPC10P48553 1259 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 INF2Q27J81 1249 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 TTC38Q5R3I4 469 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 REXO1Q8N1G1 1221 aaKnown RBP25.04■■□□□ 1.6
USF2-216ENST00000607959 SLF1Q9BQI6 1058 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 GOLPH3LQ9H4A5 285 aa25.04■■□□□ 1.6
USF2-216ENST00000607959 ZNF536O15090 1300 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 CCDC194A0A1B0GVG4 234 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 PPP6R2O75170 966 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 SH3D19Q5HYK7 790 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 CCDC174Q6PII3 467 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 SAMD1Q6SPF0 538 aaPredicted RBP25.03■■□□□ 1.6
USF2-216ENST00000607959 ANKRD13AQ8IZ07 590 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 P2RX7Q99572 595 aaKnown RBP25.03■■□□□ 1.6
USF2-216ENST00000607959 TANGO6Q9C0B7 1094 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 PSTPIP2Q9H939 334 aa25.03■■□□□ 1.6
USF2-216ENST00000607959 ZNF174Q15697 407 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 LDLRAD1Q5T700 205 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 ADALQ6DHV7 355 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 KRT25Q7Z3Z0 450 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 PRPF38AQ8NAV1 312 aaKnown RBP25.02■■□□□ 1.6
USF2-216ENST00000607959 BICD2Q8TD16 824 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 NOL7Q9UMY1 257 aaKnown RBP25.02■■□□□ 1.6
USF2-216ENST00000607959 CUL5Q93034 780 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 PPP1R9AQ9ULJ8 1098 aa25.02■■□□□ 1.6
USF2-216ENST00000607959 USP17L15C9J2P7 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L13C9JLJ4 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L11C9JVI0 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L18D6R9N7 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L22D6RA61 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L17D6RBQ6 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L19D6RCP7 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 USP17L20D6RJB6 530 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 MEIS2O14770 477 aa25.01■■□□□ 1.59
USF2-216ENST00000607959 GRIN1Q05586 938 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms