RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 STXBP3O00186 592 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 ZBED4O75132 1171 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 CETPP11597 493 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 GNA11P29992 359 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 DGKZQ13574 1117 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 FOXD4L5Q5VV16 416 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-212ENST00000601919 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 FOXD4L4Q8WXT5 416 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-212ENST00000601919 GLT8D2Q9H1C3 349 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 FBXO28Q9NVF7 368 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 AGTPBP1Q9UPW5 1226 aa21.38■■□□□ 1.01
SSBP4-212ENST00000601919 ESYT2A0FGR8 921 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 TMEM88BA6NKF7 163 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 HOXA7P31268 230 aaPredicted RBP21.37■■□□□ 1.01
SSBP4-212ENST00000601919 KRT2P35908 639 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 GJA5P36382 358 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 SPRYD7Q5W111 196 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 SAMD1Q6SPF0 538 aaPredicted RBP21.37■■□□□ 1.01
SSBP4-212ENST00000601919 BRAPQ7Z569 592 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 SAPCD2Q86UD0 394 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 BICD2Q8TD16 824 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 FOXP1Q9H334 677 aaPredicted RBP21.37■■□□□ 1.01
SSBP4-212ENST00000601919 C6orf50Q9HD87 102 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 GJB4Q9NTQ9 266 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 KCNJ14Q9UNX9 436 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 PCDHA1Q9Y5I3 950 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 TLL2Q9Y6L7 1015 aa21.37■■□□□ 1.01
SSBP4-212ENST00000601919 DSG3P32926 999 aa21.36■■□□□ 1.01
SSBP4-212ENST00000601919 ZNF157P51786 506 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-212ENST00000601919 IRX3P78415 501 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-212ENST00000601919 RGMBQ6NW40 437 aa21.36■■□□□ 1.01
SSBP4-212ENST00000601919 TEX2Q8IWB9 1127 aa21.36■■□□□ 1.01
SSBP4-212ENST00000601919 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
SSBP4-212ENST00000601919 OSBPP22059 807 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 KIF23Q02241 960 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-212ENST00000601919 FERMT3Q86UX7 667 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 DIS3L2Q8IYB7 885 aaKnown RBP21.35■■□□□ 1.01
SSBP4-212ENST00000601919 DAGLBQ8NCG7 672 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 HHIPL1Q96JK4 782 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 GBP4Q96PP9 640 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 PNMA3Q9UL41 463 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 ABT1Q9ULW3 272 aaKnown RBP21.35■■□□□ 1.01
SSBP4-212ENST00000601919 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 RLFQ13129 1914 aa21.35■■□□□ 1.01
SSBP4-212ENST00000601919 SMCO2A6NFE2 343 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 ICAM1P05362 532 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 U2AF2P26368 475 aaKnown RBP eCLIP21.34■■□□□ 1.01
SSBP4-212ENST00000601919 OAZ1P54368 228 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 RESTQ13127 1097 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 TREML2Q5T2D2 321 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 CCDC174Q6PII3 467 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 CCDC102AQ96A19 550 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 COA7Q96BR5 231 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 ADAMTS5Q9UNA0 930 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 SLC45A1Q9Y2W3 748 aa21.34■■□□□ 1.01
SSBP4-212ENST00000601919 ABCB11O95342 1321 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 VWA5AO00534 786 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 PPP1R11O60927 126 aaPredicted RBP21.33■■□□□ 1.01
SSBP4-212ENST00000601919 ADCY7P51828 1080 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 MRPL12P52815 198 aaKnown RBP21.33■■□□□ 1.01
SSBP4-212ENST00000601919 SNAP25P60880 206 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 CCL15Q16663 113 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 RASAL3Q86YV0 1011 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 BLIDQ8IZY5 108 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 MB21D1Q8N884 522 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 CUL5Q93034 780 aa21.33■■□□□ 1.01
SSBP4-212ENST00000601919 MRPL11Q9Y3B7 192 aaKnown RBP21.33■■□□□ 1.01
SSBP4-212ENST00000601919 MYH15Q9Y2K3 1946 aa21.33■■□□□ 1
SSBP4-212ENST00000601919 BTBD18B2RXH4 712 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 MOGSQ13724 837 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 USH1GQ495M9 461 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 ATL3Q6DD88 541 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 NOSTRINQ8IVI9 506 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 GTF3C2Q8WUA4 911 aaPredicted RBP21.32■■□□□ 1
SSBP4-212ENST00000601919 ATG4CQ96DT6 458 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 MS4A4AQ96JQ5 239 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 RIC8AQ9NPQ8 531 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 CCPG1Q9ULG6 757 aa21.32■■□□□ 1
SSBP4-212ENST00000601919 COL11A1P12107 1806 aaPredicted RBP21.32■■□□□ 1
SSBP4-212ENST00000601919 MANSC4A6NHS7 340 aaPredicted RBP21.31■■□□□ 1
SSBP4-212ENST00000601919 MKRN3Q13064 507 aaKnown RBP21.31■■□□□ 1
SSBP4-212ENST00000601919 MCTP2Q6DN12 878 aa21.31■■□□□ 1
SSBP4-212ENST00000601919 CLEC17AQ6ZS10 378 aa21.31■■□□□ 1
SSBP4-212ENST00000601919 SHISA4Q96DD7 197 aa21.31■■□□□ 1
SSBP4-212ENST00000601919 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
SSBP4-212ENST00000601919 ASCC2Q9H1I8 757 aaPredicted RBP21.31■■□□□ 1
SSBP4-212ENST00000601919 PSTPIP2Q9H939 334 aa21.31■■□□□ 1
SSBP4-212ENST00000601919 SPDYE16A6NNV3 312 aaPredicted RBP21.3■■□□□ 1
SSBP4-212ENST00000601919 ATP2A1O14983 1001 aa21.3■■□□□ 1
SSBP4-212ENST00000601919 SLC10A3P09131 477 aa21.3■■□□□ 1
SSBP4-212ENST00000601919 GPAT2Q6NUI2 795 aa21.3■■□□□ 1
SSBP4-212ENST00000601919 LBX2Q6XYB7 198 aa21.3■■□□□ 1
SSBP4-212ENST00000601919 ANKRD23Q86SG2 305 aa21.3■■□□□ 1
SSBP4-212ENST00000601919 REXO1Q8N1G1 1221 aaKnown RBP21.3■■□□□ 1
SSBP4-212ENST00000601919 INHBEP58166 350 aa21.29■■□□□ 1
SSBP4-212ENST00000601919 KRT85P78386 507 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms