RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SMC1AQ14683 1233 aaKnown RBP22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 LONRF2Q1L5Z9 754 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 ZNF444Q8N0Y2 327 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 MB21D1Q8N884 522 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 DAGLBQ8NCG7 672 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 GPR101Q96P66 508 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 NAPGQ99747 312 aaPredicted RBP22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 KBTBD4Q9NVX7 518 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 TRIM10Q9UDY6 481 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 REXO2Q9Y3B8 237 aaKnown RBP22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 ROBO3Q96MS0 1386 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 LGALS16A8MUM7 142 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 OAS2P29728 719 aaKnown RBP22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 KCNB1Q14721 858 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 MAPKAPK5Q8IW41 473 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 PNKPQ96T60 521 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 SBF2Q86WG5 1849 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 RGL2O15211 777 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 NFIXQ14938 502 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 JAKMIP3Q5VZ66 844 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 TMED8Q6PL24 325 aaPredicted RBP22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 CCSER1Q9C0I3 900 aa22.73■■□□□ 1.23
SHKBP1-225ENST00000600733 TNRC6CQ9HCJ0 1690 aaKnown RBP22.72■■□□□ 1.23
SHKBP1-225ENST00000600733 PALM3A6NDB9 673 aaPredicted RBP22.72■■□□□ 1.23
SHKBP1-225ENST00000600733 NDUFA10O95299 355 aa22.72■■□□□ 1.23
SHKBP1-225ENST00000600733 EPN1Q9Y6I3 576 aaPredicted RBP22.72■■□□□ 1.23
SHKBP1-225ENST00000600733 MYH1P12882 1939 aa22.72■■□□□ 1.23
SHKBP1-225ENST00000600733 RHOBTB3O94955 611 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 RASA1P20936 1047 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 CYP2C19P33261 490 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 FAM193AP78312 1265 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 BRD3Q15059 726 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 AMOTL1Q8IY63 956 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 GIMAP8Q8ND71 665 aaPredicted RBP22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 ZNF507Q8TCN5 953 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 KLRF2D3W0D1 207 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 PSMA7O14818 248 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 PLCG1P19174 1290 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 EEF1GP26641 437 aaKnown RBP22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 TTI2Q6NXR4 508 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 TCP11L1Q9NUJ3 509 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 GUCA1BQ9UMX6 200 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
SHKBP1-225ENST00000600733 FLT1P17948 1338 aa22.7■■□□□ 1.23
SHKBP1-225ENST00000600733 BAG3O95817 575 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 STIM1Q13586 685 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 GALNT17Q6IS24 598 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 OR8K1Q8NGG5 319 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 THAP9Q9H5L6 903 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 TFR2Q9UP52 801 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 LUC7L2Q9Y383 392 aaKnown RBP22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 B4DLN1 442 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 RHOXF2BP0C7M4 288 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 TUBB2AQ13885 445 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 TXNRD1Q16881 649 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 LETM2Q2VYF4 491 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 RC3H1Q5TC82 1133 aaKnown RBP22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 RHOXF2Q9BQY4 288 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 TUBB2BQ9BVA1 445 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 MYO1AQ9UBC5 1043 aa22.7■■□□□ 1.22
SHKBP1-225ENST00000600733 CCNT1O60563 726 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 NAPAP54920 295 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 CCDC178Q5BJE1 867 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 WDR59Q6PJI9 974 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 MSANTD4Q8NCY6 345 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 ARHGEF1Q92888 912 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 DNAJC7Q99615 494 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 A0A1W2PQC6 194 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 LAD1O00515 517 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 MYL1P05976 194 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 PRPHP41219 470 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 CABP7Q86V35 215 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 DUSP9Q99956 384 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 ZMYND12Q9H0C1 365 aa22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 MAGEC2Q9UBF1 373 aaPredicted RBP22.69■■□□□ 1.22
SHKBP1-225ENST00000600733 PPP4CP60510 307 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 GSTO1P78417 241 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 ST5P78524 1137 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 NCAPH2Q6IBW4 605 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 CSGALNACT2Q8N6G5 542 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 ZBTB9Q96C00 473 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 RAB21Q9UL25 225 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 CAPN11Q9UMQ6 739 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 RTCBQ9Y3I0 505 aaKnown RBP22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 OR52Z1P0C646 297 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 AMPD2Q01433 879 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 WHAMMP3Q1A5X7 153 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 BEND6Q5SZJ8 279 aaPredicted RBP22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 USP17L2Q6R6M4 530 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 MYO6Q9UM54 1294 aa22.68■■□□□ 1.22
SHKBP1-225ENST00000600733 CTAGE15A4D2H0 777 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 MAP2K7O14733 419 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 CTAGE8P0CG41 777 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 KLK7P49862 253 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 NT5C2P49902 561 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 STK4Q13043 487 aa22.67■■□□□ 1.22
SHKBP1-225ENST00000600733 CTAGE6Q86UF2 777 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms