RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 CDK8P49336 464 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 BEX3Q00994 111 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 ACVR2BQ13705 512 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 SLC9C2Q5TAH2 1124 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 KRT40Q6A162 431 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 SNRNP48Q6IEG0 339 aaKnown RBP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 SLC43A3Q8NBI5 491 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 PCSK9Q8NBP7 692 aaKnown RBP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 C11orf16Q9NQ32 467 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
TGFB1-203ENST00000598758 GRIN2DO15399 1336 aa11.28□□□□□ -0.6
TGFB1-203ENST00000598758 C5orf42Q9H799 3197 aa11.27□□□□□ -0.6
TGFB1-203ENST00000598758 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.61
TGFB1-203ENST00000598758 ARHGEF15O94989 841 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 FGBP02675 491 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 CCL23P55773 120 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
TGFB1-203ENST00000598758 AACSQ86V21 672 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
TGFB1-203ENST00000598758 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.61
TGFB1-203ENST00000598758 ERC2O15083 957 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 TLR3O15455 904 aaKnown RBP11.26□□□□□ -0.61
TGFB1-203ENST00000598758 MBD4O95243 580 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 COPB2P35606 906 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 NKX3-2P78367 333 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
TGFB1-203ENST00000598758 SLF1Q9BQI6 1058 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 MTCH2Q9Y6C9 303 aa11.26□□□□□ -0.61
TGFB1-203ENST00000598758 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
TGFB1-203ENST00000598758 FAM86C2PA6NEL3 165 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 GOLIM4O00461 696 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
TGFB1-203ENST00000598758 TLL1O43897 1013 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 RAD21O60216 631 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 TTLL4Q14679 1199 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.613e-6■■■■□ 20.9
TGFB1-203ENST00000598758 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
TGFB1-203ENST00000598758 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 SCLYQ96I15 445 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
TGFB1-203ENST00000598758 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 CERS4Q9HA82 394 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 HCN4Q9Y3Q4 1203 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 ARIH1Q9Y4X5 557 aaPredicted RBP11.25□□□□□ -0.61
TGFB1-203ENST00000598758 PCDHA11Q9Y5I1 949 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
TGFB1-203ENST00000598758 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 USP17L21D6R901 530 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 B4GALT4O60513 344 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 NDUFB10O96000 172 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 RLBP1P12271 317 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 POU3F3P20264 500 aaPredicted RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 CNTN2Q02246 1040 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 TTF1Q15361 905 aaPredicted RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 TMEM63BQ5T3F8 832 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 SPRED2Q7Z698 418 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
TGFB1-203ENST00000598758 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 ZNF318Q5VUA4 2279 aa11.24□□□□□ -0.61
TGFB1-203ENST00000598758 SIP14410 1827 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 CA3P07451 260 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 ADD2P35612 726 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 PSMC6P62333 389 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 ITGA7Q13683 1181 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 AAK1Q2M2I8 961 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 SPC25Q9HBM1 224 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 CD320Q9NPF0 282 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
TGFB1-203ENST00000598758 GNEQ9Y223 722 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms