RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ANKRD33Q7Z3H0 272 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 MYLIPQ8WY64 445 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 FSD1Q9BTV5 496 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 NAPBQ9H115 298 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 TTYH1Q9H313 450 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 HOMER2Q9NSB8 354 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 TTC41PQ6P2S7 1318 aa12.56□□□□□ -0.4
CHMP2A-202ENST00000596708 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 ASGR1P07306 291 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 FDX1P10109 184 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 SLC1A4P43007 532 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 OAZ1P54368 228 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 PPARAQ07869 468 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 CCDC144BQ3MJ40 725 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 MAFAQ8NHW3 353 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 CHURC1Q8WUH1 139 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 ACAD9Q9H845 621 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 SYNPO2Q9UMS6 1093 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 ELP1O95163 1332 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 MROH7Q68CQ1 1323 aa12.55□□□□□ -0.4
CHMP2A-202ENST00000596708 LCTP09848 1927 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 MYH6P13533 1939 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 TIMP1P01033 207 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 FOSL2P15408 326 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 MCCP23508 829 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 STAT2P52630 851 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 GJA9P57773 515 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 FGD4Q96M96 766 aa12.54□□□□□ -0.4
CHMP2A-202ENST00000596708 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 ARVCFO00192 962 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 ADCY6O43306 1168 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 ALAS1P13196 640 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 PPIGQ13427 754 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■■□ 25.5
CHMP2A-202ENST00000596708 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 CCDC174Q6PII3 467 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 PI4K2BQ8TCG2 481 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 TRERF1Q96PN7 1200 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 UPF3AQ9H1J1 476 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 MTMR7Q9Y216 660 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
CHMP2A-202ENST00000596708 TRIP12Q14669 1992 aaPredicted RBP12.52□□□□□ -0.4
CHMP2A-202ENST00000596708 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 ASB14A6NK59 587 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 CDK7P50613 346 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 SNAP25P60880 206 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 BEX3Q00994 111 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 TNFAIP2Q03169 654 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 TKFCQ3LXA3 575 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 TMEM199Q8N511 208 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 PPP1R12CQ9BZL4 782 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 TBX21Q9UL17 535 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
CHMP2A-202ENST00000596708 LRRC37A2A6NM11 1700 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 MX1P20591 662 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 DNAJB2P25686 324 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 RCSD1Q6JBY9 416 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 KATNBL1Q9H079 304 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 ZNF536O15090 1300 aa12.51□□□□□ -0.41
CHMP2A-202ENST00000596708 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 ZEB2O60315 1214 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 NMT2O60551 498 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 PLA2G6O60733 806 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 ACRP10323 421 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 CSF2RAP15509 400 aa12.5□□□□□ -0.41
CHMP2A-202ENST00000596708 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms