RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FGD4Q96M96 766 aa20.83■□□□□ 0.93
SHKBP1-203ENST00000594298 CDX2Q99626 313 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-203ENST00000594298 ABHD16BQ9H3Z7 469 aa20.83■□□□□ 0.93
SHKBP1-203ENST00000594298 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-203ENST00000594298 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 TSPY3P0CV98 308 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 TSPY8P0CW00 308 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 BMP3P12645 472 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 EPHB4P54760 987 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 KCNA10Q16322 511 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 EVI5LQ96CN4 794 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 FSD1Q9BTV5 496 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 TMEM39AQ9NV64 488 aa20.82■□□□□ 0.92
SHKBP1-203ENST00000594298 ELP1O95163 1332 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 DCDC2CA8MYV0 355 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 SLC4A3P48751 1232 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 GMCL1Q96IK5 515 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 SEC62Q99442 399 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 NAPBQ9H115 298 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 UPF3AQ9H1J1 476 aaKnown RBP20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 SMCHD1A6NHR9 2005 aa20.81■□□□□ 0.92
SHKBP1-203ENST00000594298 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 A0A0C4DFX4 3053 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 TMEM265A0A087WTH1 108 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 MYADML2A6NDP7 307 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 STAT2P52630 851 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 GJA9P57773 515 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 TFAP4Q01664 338 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 FPGSQ05932 587 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 PPARAQ07869 468 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 PPP4R3BQ5MIZ7 849 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 ZMYM1Q5SVZ6 1142 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 FAM160B2Q86V87 743 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 PCSK9Q8NBP7 692 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 RNPC3Q96LT9 517 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 GLT1D1Q96MS3 346 aa20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 TTYH1Q9H313 450 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-203ENST00000594298 MROH7Q68CQ1 1323 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 ADCY6O43306 1168 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 CDK7P50613 346 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 NKX3-2P78367 333 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 CCDC144BQ3MJ40 725 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 CHURC1Q8WUH1 139 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 STAG1Q8WVM7 1258 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 KATNBL1Q9H079 304 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 ACAD9Q9H845 621 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 SPC25Q9HBM1 224 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 TBX21Q9UL17 535 aa20.79■□□□□ 0.92
SHKBP1-203ENST00000594298 TMEM232C9JQI7 657 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 PLA2G6O60733 806 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 TIMP1P01033 207 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 NEFLP07196 543 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 ASGR1P07306 291 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 C6orf222P0C671 652 aaPredicted RBP20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 FAM133AQ8N9E0 248 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 ZNF536O15090 1300 aa20.78■□□□□ 0.92
SHKBP1-203ENST00000594298 SLC1A4P43007 532 aa20.77■□□□□ 0.92
SHKBP1-203ENST00000594298 TKFCQ3LXA3 575 aa20.77■□□□□ 0.92
SHKBP1-203ENST00000594298 COL25A1Q9BXS0 654 aaPredicted RBP20.77■□□□□ 0.92
SHKBP1-203ENST00000594298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHKBP1-203ENST00000594298 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 CTAGE5O15320 804 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 FOXP2O15409 715 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 IRX5P78411 483 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 CNTN2Q02246 1040 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 MAFAQ8NHW3 353 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 A1CFQ9NQ94 594 aaKnown RBP20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 HOMER2Q9NSB8 354 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 MYH4Q9Y623 1939 aa20.76■□□□□ 0.91
SHKBP1-203ENST00000594298 UNC80Q8N2C7 3258 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 ARVCFO00192 962 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 MCCP23508 829 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 NOVP48745 357 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 GNASQ5JWF2 1037 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 MFSD5Q6N075 450 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 AGBL1Q96MI9 1066 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 RNF146Q9NTX7 359 aa20.75■□□□□ 0.91
SHKBP1-203ENST00000594298 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 SOWAHBA6NEL2 793 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 ASB14A6NK59 587 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 RCSD1Q6JBY9 416 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 MYLIPQ8WY64 445 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 IL17RBQ9NRM6 502 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 ANAPC4Q9UJX5 808 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 ISY1Q9ULR0 285 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 STX8Q9UNK0 236 aa20.74■□□□□ 0.91
SHKBP1-203ENST00000594298 TNFAIP2Q03169 654 aa20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 IKQ13123 557 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-203ENST00000594298 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms