RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 FAM126BQ8IXS8 530 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 SLC28A3Q9HAS3 691 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 IL23AQ9NPF7 189 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 DCP1AQ9NPI6 582 aaPredicted RBP10.5□□□□□ -0.73
SMAD4-215ENST00000592911 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 COG5Q9UP83 839 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 ERC2O15083 957 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 CD4P01730 458 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 OAZ1P54368 228 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 RPUSD2Q8IZ73 545 aaKnown RBP10.49□□□□□ -0.73
SMAD4-215ENST00000592911 SLC43A3Q8NBI5 491 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 PRDM12Q9H4Q4 367 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 PCDHA11Q9Y5I1 949 aa10.49□□□□□ -0.73
SMAD4-215ENST00000592911 MYH4Q9Y623 1939 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 BMP1P13497 986 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 CSF2RAP15509 400 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 SIAH1Q8IUQ4 282 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 EAF2Q96CJ1 260 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-215ENST00000592911 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 Q9Y3F1 56 aa10.48□□□□□ -0.73
SMAD4-215ENST00000592911 ZEB2O60315 1214 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-215ENST00000592911 FGBP02675 491 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 PGK2P07205 417 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 ASGR1P07306 291 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 PDE6AP16499 860 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 ACVR2BQ13705 512 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 ADGRE1Q14246 886 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 PRPF38AQ8NAV1 312 aaKnown RBP10.47□□□□□ -0.73
SMAD4-215ENST00000592911 CHST13Q8NET6 341 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 XIRP2A4UGR9 3374 aa10.47□□□□□ -0.73
SMAD4-215ENST00000592911 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 GPR37L1O60883 481 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 C6orf222P0C671 652 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-215ENST00000592911 TAL1P17542 331 aaPredicted RBP10.46□□□□□ -0.73
SMAD4-215ENST00000592911 PBX2P40425 430 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
SMAD4-215ENST00000592911 C12orf60Q5U649 245 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 ZKSCAN2Q63HK3 967 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 SPICE1Q8N0Z3 855 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 SLF1Q9BQI6 1058 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 HIPK3Q9H422 1215 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
SMAD4-215ENST00000592911 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 SUPT20HL2P0C7V6 817 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 EEF2P13639 858 aaKnown RBP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 AKR1B1P15121 316 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 IGFBP4P22692 258 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 RFC2P35250 354 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 CDK8P49336 464 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 CCDC144BQ3MJ40 725 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 GNASQ5JWF2 1037 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 RPAP2Q8IXW5 612 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 PHOSPHO2Q8TCD6 241 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 ANTXR1Q9H6X2 564 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 LMCD1Q9NZU5 365 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 NYAP2Q9P242 653 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 ZHX1Q9UKY1 873 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-215ENST00000592911 SLC4A7Q9Y6M7 1214 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 SCN10AQ9Y5Y9 1956 aa10.45□□□□□ -0.74
SMAD4-215ENST00000592911 LRRC37A2A6NM11 1700 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 ZNF532Q9HCE3 1301 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 ASB14A6NK59 587 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 APBB1O00213 710 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 ZBED4O75132 1171 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 TMEM31Q5JXX7 168 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 SNRNP48Q6IEG0 339 aaKnown RBP10.44□□□□□ -0.74
SMAD4-215ENST00000592911 GIMAP6Q6P9H5 292 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 VTI1AQ96AJ9 217 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 SLC9A7Q96T83 725 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 TMEM121BQ9BXQ6 578 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-215ENST00000592911 CCDC8Q9H0W5 538 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-215ENST00000592911 KCNH6Q9H252 994 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 SLC38A10Q9HBR0 1119 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 ZNF287Q9HBT7 754 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 TLR7Q9NYK1 1049 aaKnown RBP10.44□□□□□ -0.74
SMAD4-215ENST00000592911 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
SMAD4-215ENST00000592911 TANC1Q9C0D5 1861 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-215ENST00000592911 CTAGE5O15320 804 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 ACTN1P12814 892 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 UBE3CQ15386 1083 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 ARMCX2Q7L311 632 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 AACSQ86V21 672 aa10.43□□□□□ -0.74
SMAD4-215ENST00000592911 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms