RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 CXCL11O14625 94 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 SPTLC2O15270 562 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 SCG2P13521 617 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 CAP1Q01518 475 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 MAP3K10Q02779 954 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 CEBPZQ03701 1054 aaKnown RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 SLC39A14Q15043 492 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 STK38Q15208 465 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 SAFBQ15424 915 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS25-205ENST00000590339 PFKFB3Q16875 520 aaPredicted RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 AXDND1Q5T1B0 1012 aaPredicted RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 GADL1Q6ZQY3 521 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 METTL16Q86W50 562 aaKnown RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 FAM177A1Q8N128 213 aaPredicted RBP10.82□□□□□ -0.68
VPS25-205ENST00000590339 TNFRSF25Q93038 417 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 CEP95Q96GE4 821 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 SPZ1Q9BXG8 430 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 DNAJC18Q9H819 358 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 DACT1Q9NYF0 836 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 PI4KBQ9UBF8 816 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 PCDHA7Q9UN72 937 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 KCNJ14Q9UNX9 436 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 KCNH4Q9UQ05 1017 aa10.82□□□□□ -0.68
VPS25-205ENST00000590339 FAM237AA0A1B0GTK4 181 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 BTBD18B2RXH4 712 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 TBC1D12O60347 775 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 TLR2O60603 784 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 PPP6R2O75170 966 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 NR1I2O75469 434 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 SNHG28P0DPA3 235 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 CYP2C8P10632 490 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 AKR1B1P15121 316 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 XBP1P17861 261 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 MLLT1Q03111 559 aaPredicted RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 FAM160A1Q05DH4 1040 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 ANKRD23Q86SG2 305 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 CCDC82Q8N4S0 544 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 MRPS27Q92552 414 aaKnown RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 LZTS2Q9BRK4 669 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 TRIM34Q9BYJ4 488 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 MTMR4Q9NYA4 1195 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 AFG3L2Q9Y4W6 797 aa10.81□□□□□ -0.68
VPS25-205ENST00000590339 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
VPS25-205ENST00000590339 SMARCA1P28370 1054 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 KRT2P35908 639 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 ME1P48163 572 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 TOB1P50616 345 aaPredicted RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 SPP2Q13103 211 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 NR5A1Q13285 461 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 SNW1Q13573 536 aaKnown RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 MOGSQ13724 837 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 GNL2Q13823 731 aaKnown RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 KIF22Q14807 665 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 SF3A1Q15459 793 aaKnown RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 RILPL1Q5EBL4 403 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 CCDC73Q6ZRK6 1079 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 FASTKD5Q7L8L6 764 aaKnown RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 FOXP4Q8IVH2 680 aaPredicted RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 STAG2Q8N3U4 1231 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 OXER1Q8TDS5 423 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 CCDC17Q96LX7 622 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 ARHGAP39Q9C0H5 1083 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 SH3GLB2Q9NR46 395 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
VPS25-205ENST00000590339 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 PTPN22Q9Y2R2 807 aa10.8□□□□□ -0.68
VPS25-205ENST00000590339 hCG_1642624A0A1W2PR95 340 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 CYTH3O43739 400 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 MYCP01106 439 aaPredicted RBP10.79□□□□□ -0.68
VPS25-205ENST00000590339 CAP2P40123 477 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 RGS19P49795 217 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 ARHGEF6Q15052 776 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 C17orf99Q6UX52 265 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 RASGRP2Q7LDG7 609 aa10.79□□□□□ -0.68
VPS25-205ENST00000590339 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
VPS25-205ENST00000590339 ZCCHC17Q9NP64 241 aaKnown RBP10.79□□□□□ -0.68
VPS25-205ENST00000590339 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
VPS25-205ENST00000590339 BAZ2BQ9UIF8 2168 aaKnown RBP10.79□□□□□ -0.68
VPS25-205ENST00000590339 A0A0G2JLL6 359 aaPredicted RBP10.78□□□□□ -0.68
VPS25-205ENST00000590339 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 CTAGE5O15320 804 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 CUTAO60888 179 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 GDF11O95390 407 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
VPS25-205ENST00000590339 PDHBP11177 359 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 CMA1P23946 247 aa10.78□□□□□ -0.68
VPS25-205ENST00000590339 PSMC4P43686 418 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms