RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	MNX1	P50219	401 aa	Predicted RBP	20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	CCDC178	Q5BJE1	867 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	SYDE2	Q5VT97	1194 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	CREB3L3	Q68CJ9	461 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	CHST3	Q7LGC8	479 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	DPP9	Q86TI2	863 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	MAML3	Q96JK9	1138 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	ANO2	Q9NQ90	1003 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	FRMPD3	Q5JV73	1810 aa		20.32	■□□□□ 0.84
MBD1-221	ENST00000589867	LCT	P09848	1927 aa		20.31	■□□□□ 0.84
MBD1-221	ENST00000589867	IK	Q13123	557 aa	Predicted RBP	20.31	■□□□□ 0.84
MBD1-221	ENST00000589867	KIAA1211	Q6ZU35	1233 aa		20.31	■□□□□ 0.84
MBD1-221	ENST00000589867	HMX1	Q9NP08	348 aa	Predicted RBP	20.31	■□□□□ 0.84
MBD1-221	ENST00000589867	GPHN	Q9NQX3	736 aa	Predicted RBP	20.31	■□□□□ 0.84
MBD1-221	ENST00000589867	MCM3AP	O60318	1980 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	CYBA	P13498	195 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	SLC4A3	P48751	1232 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	SLC35G1	Q2M3R5	365 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	MUM1L1	Q5H9M0	696 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	LHX8	Q68G74	356 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	CCDC174	Q6PII3	467 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	NCOA7	Q8NI08	942 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	IGDCC4	Q8TDY8	1250 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	UBAC1	Q9BSL1	405 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	UBA5	Q9GZZ9	404 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	KAT14	Q9H8E8	782 aa		20.3	■□□□□ 0.84
MBD1-221	ENST00000589867	CEP290	O15078	2479 aa		20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	KCTD2	Q14681	263 aa		20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	RASEF	Q8IZ41	740 aa		20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	STAG2	Q8N3U4	1231 aa		20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	CHST13	Q8NET6	341 aa		20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	DIS3	Q9Y2L1	958 aa	Known RBP	20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	BAZ2B	Q9UIF8	2168 aa	Known RBP	20.29	■□□□□ 0.84
MBD1-221	ENST00000589867	ICAM1	P05362	532 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	TRDN	Q13061	729 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	PRAMEF19	Q5SWL8	479 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	GPATCH4	Q5T3I0	446 aa	Known RBP	20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	IFIT1B	Q5T764	474 aa	Known RBP	20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	MFSD14C	Q5VZR4	134 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	A1CF	Q9NQ94	594 aa	Known RBP	20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	HOMER2	Q9NSB8	354 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	RNF146	Q9NTX7	359 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	OGDHL	Q9ULD0	1010 aa		20.28	■□□□□ 0.84
MBD1-221	ENST00000589867	ASTN1	O14525	1302 aa		20.27	■□□□□ 0.84
MBD1-221	ENST00000589867	TRERF1	Q96PN7	1200 aa		20.27	■□□□□ 0.84
MBD1-221	ENST00000589867	MAD2L2	Q9UI95	211 aa		20.27	■□□□□ 0.84
MBD1-221	ENST00000589867	CTDP1	Q9Y5B0	961 aa	Predicted RBP	20.27	■□□□□ 0.84
MBD1-221	ENST00000589867	IFIT3	O14879	490 aa	Known RBP	20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	ALAS1	P13196	640 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	CNTN2	Q02246	1040 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	TROAP	Q12815	778 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	TKFC	Q3LXA3	575 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	ASPRV1	Q53RT3	343 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	RALYL	Q86SE5	291 aa	Known RBP	20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	FAM133A	Q8N9E0	248 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	DIS3L	Q8TF46	1054 aa	Known RBP	20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	CLEC4D	Q8WXI8	215 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	TINF2	Q9BSI4	451 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	ACAD9	Q9H845	621 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	LY9	Q9HBG7	655 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	FBXO40	Q9UH90	709 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	CCPG1	Q9ULG6	757 aa		20.26	■□□□□ 0.83
MBD1-221	ENST00000589867	ALPK3	Q96L96	1907 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	PALM3	A6NDB9	673 aa	Predicted RBP	20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	SNAI1	O95863	264 aa	Predicted RBP	20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	TFRC	P02786	760 aa	Known RBP	20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	ADCK5	Q3MIX3	580 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	TSGA10IP	Q3SY00	556 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	ADGRF4	Q8IZF3	695 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	KCNB2	Q92953	911 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	SLC5A4	Q9NY91	659 aa		20.25	■□□□□ 0.83
MBD1-221	ENST00000589867	MYH6	P13533	1939 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	SOWAHB	A6NEL2	793 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	NFIB	O00712	420 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	FARP2	O94887	1054 aa	Predicted RBP	20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	PARP1	P09874	1014 aa	Known RBP	20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	GRM4	Q14833	912 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	TMEM67	Q5HYA8	995 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	MAMDC4	Q6UXC1	1216 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	MTMR8	Q96EF0	704 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	DDX11	Q96FC9	970 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	PURB	Q96QR8	312 aa	Known RBP	20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	JMJD4	Q9H9V9	463 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	WDR19	Q8NEZ3	1342 aa		20.24	■□□□□ 0.83
MBD1-221	ENST00000589867	SH2B2	O14492	632 aa	Predicted RBP	20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	PRC1	O43663	620 aa		20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	ZNF865	P0CJ78	1059 aa	Predicted RBP	20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	WTAP	Q15007	396 aa		20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	DNAH12	Q6ZR08	3092 aa		20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	ZNF467	Q7Z7K2	595 aa	Predicted RBP	20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	ANKRD35	Q8N283	1001 aa		20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	CYP39A1	Q9NYL5	469 aa		20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	DDX20	Q9UHI6	824 aa	Known RBP	20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	DDX49	Q9Y6V7	483 aa	Known RBP	20.23	■□□□□ 0.83
MBD1-221	ENST00000589867	CDC37	Q16543	378 aa	Predicted RBP	20.22	■□□□□ 0.83
MBD1-221	ENST00000589867	CASC1	Q6TDU7	716 aa		20.22	■□□□□ 0.83
MBD1-221	ENST00000589867	PAWR	Q96IZ0	340 aa	Known RBP	20.22	■□□□□ 0.83
MBD1-221	ENST00000589867	MTA3	Q9BTC8	594 aa		20.22	■□□□□ 0.83
MBD1-221	ENST00000589867	LRRC2	Q9BYS8	371 aa		20.22	■□□□□ 0.83
MBD1-221	ENST00000589867	KATNBL1	Q9H079	304 aa		20.22	■□□□□ 0.83

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