RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CCDC144BQ3MJ40 725 aa14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ANKRD35Q8N283 1001 aa14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 KIF1BPQ96EK5 621 aa14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PAG1Q9NWQ8 432 aa14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CXXC1Q9P0U4 656 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ACRP10323 421 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NKX3-2P78367 333 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ADGRE1Q14246 886 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 UBE3CQ15386 1083 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CCDC85BQ15834 202 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ZSCAN25Q6NSZ9 544 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CHST13Q8NET6 341 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NYAP2Q9P242 653 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 MUC6Q6W4X9 2439 aa14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 PRRC2BQ5JSZ5 2229 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-216ENST00000579853 F5H6K3 240 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CD4P01730 458 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 FDX1P10109 184 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CYP2C18P33260 490 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 OAZ1P54368 228 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 KLRC3Q07444 240 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RPUSD2Q8IZ73 545 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 HIPK3Q9H422 1215 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SYNPO2Q9UMS6 1093 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RIPK3Q9Y572 518 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 MCM3APO60318 1980 aa14.63□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CYP2D7A0A087X1C5 515 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CTR9Q6PD62 1173 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SLC43A3Q8NBI5 491 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NKX2-4Q9H2Z4 354 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ZNF287Q9HBT7 754 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ARIH1Q9Y4X5 557 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ZEB2O60315 1214 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 HMMRO75330 724 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SLC4A3P48751 1232 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 PPP2R2DQ66LE6 453 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SLC38A10Q9HBR0 1119 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RAPGEFL1Q9UHV5 662 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 FEM1BQ9UK73 627 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 PCDHA11Q9Y5I1 949 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 BRWD1Q9NSI6 2320 aa14.61□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ASB14A6NK59 587 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ADCY6O43306 1168 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NDUFB10O96000 172 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RLBP1P12271 317 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 BMP1P13497 986 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ATP5JP18859 108 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ITGA7Q13683 1181 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SBK1Q52WX2 424 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 GIMAP6Q6P9H5 292 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 OTOP2Q7RTS6 562 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CCDC144CPQ8IYA2 1237 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 KIFC2Q96AC6 838 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 AP5M1Q9H0R1 490 aa14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 GREB1LQ9C091 1923 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-216ENST00000579853 GBF1Q92538 1859 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 MYH7P12883 1935 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CTAGE5O15320 804 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 PFKMP08237 780 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RASA1P20936 1047 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 IRX5P78411 483 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 FSCN1Q16658 493 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 CXCL17Q6UXB2 119 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 RPAP2Q8IXW5 612 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 MKL1Q969V6 931 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 FGD4Q96M96 766 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 HAUS7Q99871 368 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 KATNBL1Q9H079 304 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 BOLA2Q9H3K6 86 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 ACAD9Q9H845 621 aa14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 YBX2Q9Y2T7 364 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 TCF20Q9UGU0 1960 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-216ENST00000579853 SMIM22K7EJ46 135 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ERC2O15083 957 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 POU3F3P20264 500 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 BEX3Q00994 111 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 NOC4LQ9BVI4 516 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 COG5Q9UP83 839 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 Q9Y3F1 56 aa14.58□□□□□ -0.08
CDK5RAP3-216ENST00000579853 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
CDK5RAP3-216ENST00000579853 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms