RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 GMCL1Q96IK5 515 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 RNPC3Q96LT9 517 aaKnown RBP14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 TOX2Q96NM4 488 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 ABHD16BQ9H3Z7 469 aa14.92□□□□□ -0.02
SMARCD2-207ENST00000578234 CUL9Q8IWT3 2517 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 TMEM232C9JQI7 657 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 MX1P20591 662 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 ITGB8P26012 769 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 STAT2P52630 851 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 SMAD3P84022 425 aaKnown RBP14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 IKQ13123 557 aaPredicted RBP14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 KCNA10Q16322 511 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 PPP4R3BQ5MIZ7 849 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 NOL8Q76FK4 1167 aaKnown RBP14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 FAM160B2Q86V87 743 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 FGD4Q96M96 766 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 CDX2Q99626 313 aaPredicted RBP14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 SEMA6BQ9H3T3 888 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 STARD7Q9NQZ5 370 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 MYO9BQ13459 2157 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 UNC80Q8N2C7 3258 aa14.91□□□□□ -0.02
SMARCD2-207ENST00000578234 DCDC2CA8MYV0 355 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 PLA2G6O60733 806 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 CST5P28325 142 aaPredicted RBP14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 FAAP100Q0VG06 881 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 CCDC144BQ3MJ40 725 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 MYLIPQ8WY64 445 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 HOMER2Q9NSB8 354 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 ELP1O95163 1332 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
SMARCD2-207ENST00000578234 MCM3APO60318 1980 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 FOXP2O15409 715 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 MCCP23508 829 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 SLC1A4P43007 532 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 RCSD1Q6JBY9 416 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 ARMCX2Q7L311 632 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 PCSK9Q8NBP7 692 aaKnown RBP14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 MAFAQ8NHW3 353 aaPredicted RBP14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 STAG1Q8WVM7 1258 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 GLT1D1Q96MS3 346 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 ACAD9Q9H845 621 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 SPC25Q9HBM1 224 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 MTMR7Q9Y216 660 aa14.89□□□□□ -0.03
SMARCD2-207ENST00000578234 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 ADCY6O43306 1168 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 C6orf222P0C671 652 aaPredicted RBP14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 FOSL2P15408 326 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 CDK7P50613 346 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 GJA9P57773 515 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 NKX3-2P78367 333 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 CNTN2Q02246 1040 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 FPGSQ05932 587 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 AAMPQ13685 434 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 TKFCQ3LXA3 575 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 FAM133AQ8N9E0 248 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 COL25A1Q9BXS0 654 aaPredicted RBP14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 KATNBL1Q9H079 304 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 UPF3AQ9H1J1 476 aaKnown RBP14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 IL17RBQ9NRM6 502 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 ANAPC4Q9UJX5 808 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 STX8Q9UNK0 236 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 ZNF536O15090 1300 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 MROH7Q68CQ1 1323 aa14.88□□□□□ -0.03
SMARCD2-207ENST00000578234 MYADML2A6NDP7 307 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 IGHDP01880 384 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 ASGR1P07306 291 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 NOVP48745 357 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 EPHB4P54760 987 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 CTDSPL2Q05D32 466 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 ALX1Q15699 326 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 GNASQ5JWF2 1037 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 ANKRD45Q5TZF3 282 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 EVI5LQ96CN4 794 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 AGBL1Q96MI9 1066 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 A1CFQ9NQ94 594 aaKnown RBP14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 RNF146Q9NTX7 359 aa14.87□□□□□ -0.03
SMARCD2-207ENST00000578234 EYSQ5T1H1 3165 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 ORC4O43929 436 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 TIMP1P01033 207 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 FGRP09769 529 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 IRX5P78411 483 aaPredicted RBP14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 KCTD1Q719H9 257 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 TICAM2Q86XR7 235 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 PPM1EQ8WY54 764 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 TRERF1Q96PN7 1200 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 TBX21Q9UL17 535 aa14.86□□□□□ -0.03
SMARCD2-207ENST00000578234 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 ASB14A6NK59 587 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 CTAGE5O15320 804 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms