RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SIPA1L3O60292 1781 aaPredicted RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 ZNF142P52746 1687 aaPredicted RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 FAM13AO94988 1023 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 CYP7A1P22680 504 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 CMA1P23946 247 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 EVCP57679 992 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 WTAPQ15007 396 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 SLC39A14Q15043 492 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 RTN1Q16799 776 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 SARM1Q6SZW1 724 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 TMEM87BQ96K49 555 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 CCDC94Q9BW85 323 aaPredicted RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 BTBD18B2RXH4 712 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 TPD52L2O43399 206 aaKnown RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 CDC25BP30305 580 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 GSDMDP57764 484 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 NLRP12P59046 1061 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 SUSD4Q5VX71 490 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 SLC10A4Q96EP9 437 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
VAPA-203ENST00000577539 PIF1Q9H611 641 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 CDHR2Q9BYE9 1310 aa6.13□□□□□ -1.43
VAPA-203ENST00000577539 ALS2Q96Q42 1657 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 ARFGEF2Q9Y6D5 1785 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 hCG_1642624A0A1W2PR95 340 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 ATP1A3P13637 1013 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 U2AF2P26368 475 aaKnown RBP eCLIP6.12□□□□□ -1.43
VAPA-203ENST00000577539 RBL2Q08999 1139 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 AKNAD1Q5T1N1 836 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 DIS3L2Q8IYB7 885 aaKnown RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 LCORLQ8N3X6 602 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 ACBD3Q9H3P7 528 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 STIM2Q9P246 746 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 ADAMTSL3P82987 1691 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 POTECB2RU33 542 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 PARNO95453 639 aaKnown RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 SMTNP53814 917 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 UBASH3AP57075 661 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 TRIM32Q13049 653 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 CCDC152Q4G0S7 254 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 AXDND1Q5T1B0 1012 aaPredicted RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 SDR42E1Q8WUS8 393 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 EPB41L4AQ9HCS5 686 aaPredicted RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 KCNH3Q9ULD8 1083 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 PAXBP1Q9Y5B6 917 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 UBN2Q6ZU65 1347 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 LMTK3Q96Q04 1460 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 RNF223E7ERA6 249 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 RANBP6O60518 1105 aaKnown RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 PRDM1O75626 825 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 GUCY1A2P33402 732 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 IL6STP40189 918 aaPredicted RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 CCDC24Q8N4L8 307 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 KIF18AQ8NI77 898 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 WASF1Q92558 559 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 KRT23Q9C075 422 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 TGIF2Q9GZN2 237 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 LY9Q9HBG7 655 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 METTL5Q9NRN9 209 aaKnown RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 DDX41Q9UJV9 622 aaKnown RBP6.12□□□□□ -1.43
VAPA-203ENST00000577539 MROH7-TTC4A0A0A0MT08 1334 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 MROH5Q6ZUA9 1318 aa6.12□□□□□ -1.43
VAPA-203ENST00000577539 ADAMTS7Q9UKP4 1686 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 GTF2F1P35269 517 aaKnown RBP eCLIP6.11□□□□□ -1.43
VAPA-203ENST00000577539 SLC4A8Q2Y0W8 1093 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 SHC4Q6S5L8 630 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 CREBRFQ8IUR6 639 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 SLC9A9Q8IVB4 645 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 CNNM2Q9H8M5 875 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 GYG1P46976 350 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 GOLGA8FQ08AF8 430 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 GOLGA8DPQ0D2H9 430 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 NR5A1Q13285 461 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 ZNF827Q17R98 1081 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 LHX8Q68G74 356 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 KLHL10Q6JEL2 608 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 FBXL16Q8N461 479 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 VGLL2Q8N8G2 317 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 HOOK1Q9UJC3 728 aaKnown RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 PCDHA5Q9Y5H7 936 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 KCPQ6ZWJ8 1503 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 GSG1L2A8MUP6 293 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 FOXN1O15353 648 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 TOP1P11387 765 aaKnown RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 CRKLP46109 303 aaKnown RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 RBM6P78332 1123 aaKnown RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 CCZ1BP86790 482 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 CCZ1P86791 482 aaPredicted RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 MYL5Q02045 173 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 DDB1Q16531 1140 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 SYT10Q6XYQ8 523 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 CCAR2Q8N163 923 aaKnown RBP6.11□□□□□ -1.43
VAPA-203ENST00000577539 CCDC150Q8NCX0 1101 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 CABP5Q9NP86 173 aa6.11□□□□□ -1.43
VAPA-203ENST00000577539 ZNF215Q9UL58 517 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms