RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 HMGCRP04035 888 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 ERVK-9P63128 1117 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 ERVK-24P63145 666 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 GABPAQ06546 454 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 MAP3K12Q12852 859 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 SLC9C2Q5TAH2 1124 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 GLMNQ92990 594 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 FEZ1Q99689 392 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 PRO3102Q9H379 93 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 TMOD4Q9NZQ9 345 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
NPLOC4-210ENST00000572824 DNAH12Q6ZR08 3092 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 PFASO15067 1338 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 MYH4Q9Y623 1939 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 MBD4O95243 580 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 AKR1B1P15121 316 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 GPR142Q7Z601 462 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 ERC1Q8IUD2 1116 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 USP6NLQ92738 828 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 EHD4Q9H223 541 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 DCP1AQ9NPI6 582 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-210ENST00000572824 ZNF236Q9UL36 1845 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 SYN1P17600 705 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 C7orf61Q8IZ16 206 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 GPRC5AQ8NFJ5 357 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 KIF1BPQ96EK5 621 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 C12orf42Q96LP6 360 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 SMCHD1A6NHR9 2005 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 MCM3APO60318 1980 aa11.17□□□□□ -0.62
NPLOC4-210ENST00000572824 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 C19orf81C9J6K1 198 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 ADD2P35612 726 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 SPICE1Q8N0Z3 855 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 CLASRPQ8N2M8 674 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 TRPV1Q8NER1 839 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 PAG1Q9NWQ8 432 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
NPLOC4-210ENST00000572824 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 CATSPERGQ6ZRH7 1159 aa11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 CRNKL1Q9BZJ0 848 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 PUS7LQ9H0K6 701 aaKnown RBP11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-210ENST00000572824 COL6A3P12111 3177 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 RPTORQ8N122 1335 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 ZKSCAN1P17029 563 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 ANO1Q5XXA6 986 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 RPAP2Q8IXW5 612 aaPredicted RBP11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 ATG4CQ96DT6 458 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 APBA2Q99767 749 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 HAUS7Q99871 368 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 HTATIP2Q9BUP3 242 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
NPLOC4-210ENST00000572824 ATP5JP18859 108 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 CYP2C19P33261 490 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 LRRC26Q2I0M4 334 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms