RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 AGBL1Q96MI9 1066 aa24.45■■□□□ 1.5
LITAF-205ENST00000570904 ZHX1Q9UKY1 873 aaPredicted RBP24.45■■□□□ 1.5
LITAF-205ENST00000570904 ZNF536O15090 1300 aa24.44■■□□□ 1.5
LITAF-205ENST00000570904 FDX1P10109 184 aa24.44■■□□□ 1.5
LITAF-205ENST00000570904 SNAP25P60880 206 aa24.44■■□□□ 1.5
LITAF-205ENST00000570904 TRIM60Q495X7 471 aa24.44■■□□□ 1.5
LITAF-205ENST00000570904 MAMDC4Q6UXC1 1216 aa24.44■■□□□ 1.5
LITAF-205ENST00000570904 ZMYM6O95789 1325 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 NOVP48745 357 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 RCSD1Q6JBY9 416 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 CCDC174Q6PII3 467 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 RNF180Q86T96 592 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 ACAD9Q9H845 621 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 RNF146Q9NTX7 359 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 PHF24Q9UPV7 400 aa24.43■■□□□ 1.5
LITAF-205ENST00000570904 PLA2G6O60733 806 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 SDSP20132 328 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 SNX17Q15036 470 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 CCDC96Q2M329 555 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 ZNF467Q7Z7K2 595 aaPredicted RBP24.42■■□□□ 1.5
LITAF-205ENST00000570904 OSBPL3Q9H4L5 887 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.42■■□□□ 1.5
LITAF-205ENST00000570904 PRKAG2Q9UGJ0 569 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 PRR12Q9ULL5 1215 aa24.42■■□□□ 1.5
LITAF-205ENST00000570904 ADAMTS4O75173 837 aa24.41■■□□□ 1.5
LITAF-205ENST00000570904 CNTN2Q02246 1040 aa24.41■■□□□ 1.5
LITAF-205ENST00000570904 TBC1D10CQ8IV04 446 aa24.41■■□□□ 1.5
LITAF-205ENST00000570904 DCAF4Q8WV16 495 aa24.41■■□□□ 1.5
LITAF-205ENST00000570904 LBHD1Q9BQE6 289 aaPredicted RBP24.41■■□□□ 1.5
LITAF-205ENST00000570904 PRDM5Q9NQX1 630 aaPredicted RBP24.41■■□□□ 1.5
LITAF-205ENST00000570904 FAM184BQ9ULE4 1060 aa24.41■■□□□ 1.5
LITAF-205ENST00000570904 SYNRGQ9UMZ2 1314 aa24.4■■□□□ 1.5
LITAF-205ENST00000570904 ALAS1P13196 640 aa24.4■■□□□ 1.5
LITAF-205ENST00000570904 LRIT3Q3SXY7 679 aa24.4■■□□□ 1.5
LITAF-205ENST00000570904 ARMCX2Q7L311 632 aa24.4■■□□□ 1.5
LITAF-205ENST00000570904 TMEM47Q9BQJ4 181 aa24.4■■□□□ 1.5
LITAF-205ENST00000570904 A1CFQ9NQ94 594 aaKnown RBP24.4■■□□□ 1.5
LITAF-205ENST00000570904 A0A1W2PQ45 241 aaPredicted RBP24.39■■□□□ 1.49
LITAF-205ENST00000570904 A0A1W2PQY0 241 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 POTEB2H3BUK9 544 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 ACVR2BQ13705 512 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 TTBK2Q6IQ55 1244 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 TRERF1Q96PN7 1200 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 PDLIM7Q9NR12 457 aa24.39■■□□□ 1.49
LITAF-205ENST00000570904 ADCY6O43306 1168 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 TOP1P11387 765 aaKnown RBP24.38■■□□□ 1.49
LITAF-205ENST00000570904 SLC16A2P36021 539 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
LITAF-205ENST00000570904 TKFCQ3LXA3 575 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 AKNAD1Q5T1N1 836 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 CWC27Q6UX04 472 aaKnown RBP24.38■■□□□ 1.49
LITAF-205ENST00000570904 CCDC144CPQ8IYA2 1237 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 FAM133AQ8N9E0 248 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 TCP11L1Q9NUJ3 509 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 LTBP2Q14767 1821 aa24.38■■□□□ 1.49
LITAF-205ENST00000570904 FRMPD2Q68DX3 1309 aaPredicted RBP24.37■■□□□ 1.49
LITAF-205ENST00000570904 MCM3APO60318 1980 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 MYADML2A6NDP7 307 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 TLE2Q04725 743 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 MUM1L1Q5H9M0 696 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 C1orf53Q5VUE5 145 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 MFSD6Q6ZSS7 791 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 SH3RF1Q7Z6J0 888 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 ABHD16BQ9H3Z7 469 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 DIAPH3Q9NSV4 1193 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 CCPG1Q9ULG6 757 aa24.37■■□□□ 1.49
LITAF-205ENST00000570904 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
LITAF-205ENST00000570904 NEDD4P46934 1319 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 SOWAHBA6NEL2 793 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 DUSP11O75319 330 aaKnown RBP24.36■■□□□ 1.49
LITAF-205ENST00000570904 IRX5P78411 483 aaPredicted RBP24.36■■□□□ 1.49
LITAF-205ENST00000570904 CCDC144BQ3MJ40 725 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 KLHDC9Q8NEP7 349 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 KATNBL1Q9H079 304 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 GPCPD1Q9NPB8 672 aa24.36■■□□□ 1.49
LITAF-205ENST00000570904 DDX49Q9Y6V7 483 aaKnown RBP24.36■■□□□ 1.49
LITAF-205ENST00000570904 TRIM43BA6NCK2 446 aa24.35■■□□□ 1.49
LITAF-205ENST00000570904 SYDE2Q5VT97 1194 aa24.35■■□□□ 1.49
LITAF-205ENST00000570904 TRIM43Q96BQ3 446 aaPredicted RBP24.35■■□□□ 1.49
LITAF-205ENST00000570904 TSEN34Q9BSV6 310 aaKnown RBP24.35■■□□□ 1.49
LITAF-205ENST00000570904 RANBP17Q9H2T7 1088 aaKnown RBP24.35■■□□□ 1.49
LITAF-205ENST00000570904 LAMA2P24043 3122 aaKnown RBP24.35■■□□□ 1.49
LITAF-205ENST00000570904 PQBP1O60828 265 aaKnown RBP24.34■■□□□ 1.49
LITAF-205ENST00000570904 ICAM1P05362 532 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 PCP11498 1178 aaKnown RBP24.34■■□□□ 1.49
LITAF-205ENST00000570904 ACLYP53396 1101 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 KCNA10Q16322 511 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 BTNL9Q6UXG8 535 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 Q7L0L9 218 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 BADQ92934 168 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 RNF41Q9H4P4 317 aaPredicted RBP24.34■■□□□ 1.49
LITAF-205ENST00000570904 ASTN1O14525 1302 aa24.34■■□□□ 1.49
LITAF-205ENST00000570904 ZNF213O14771 459 aa24.33■■□□□ 1.49
LITAF-205ENST00000570904 C6orf222P0C671 652 aaPredicted RBP24.33■■□□□ 1.49
LITAF-205ENST00000570904 PDHBP11177 359 aa24.33■■□□□ 1.49
LITAF-205ENST00000570904 CCSAPQ6IQ19 270 aaPredicted RBP24.33■■□□□ 1.49
LITAF-205ENST00000570904 NSMFQ6X4W1 530 aa24.33■■□□□ 1.49
LITAF-205ENST00000570904 ZKSCAN3Q9BRR0 538 aa24.33■■□□□ 1.49
LITAF-205ENST00000570904 STARD7Q9NQZ5 370 aa24.33■■□□□ 1.49
LITAF-205ENST00000570904 CYP39A1Q9NYL5 469 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms