RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 ZNF654Q8IZM8 581 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
CDT1-203ENST00000569140 DDX11Q96FC9 970 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 RNF146Q9NTX7 359 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 SLC5A4Q9NY91 659 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 SLC12A7Q9Y666 1083 aa14.94□□□□□ -0.02
CDT1-203ENST00000569140 KLRF2D3W0D1 207 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 ATP2A1O14983 1001 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 STRNO43815 780 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
CDT1-203ENST00000569140 PGK2P07205 417 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 RXRAP19793 462 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 PSMA5P28066 241 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 GRM4Q14833 912 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 CDC37Q16543 378 aaPredicted RBP14.93□□□□□ -0.02
CDT1-203ENST00000569140 TSGA10IPQ3SY00 556 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 USH1GQ495M9 461 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 ANKRD35Q8N283 1001 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 TMTC2Q8N394 836 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 TRIB2Q92519 343 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 ZNF333Q96JL9 665 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 MTA3Q9BTC8 594 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
CDT1-203ENST00000569140 ACAD9Q9H845 621 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
CDT1-203ENST00000569140 EPB41L2O43491 1005 aaKnown RBP14.92□□□□□ -0.02
CDT1-203ENST00000569140 DDAH1O94760 285 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 HMGCRP04035 888 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 ICAM1P05362 532 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 KIF5BP33176 963 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 CCL14Q16627 93 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 MICU3Q86XE3 530 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 HOMER1Q86YM7 354 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 ADGRF4Q8IZF3 695 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 CHST13Q8NET6 341 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 NPLOC4Q8TAT6 608 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 PIBF1Q8WXW3 757 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 DOCK3Q8IZD9 2030 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 ZNF536O15090 1300 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 WDR19Q8NEZ3 1342 aa14.92□□□□□ -0.02
CDT1-203ENST00000569140 CALM1P0DP23 149 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 CALM2P0DP24 149 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 CALM3P0DP25 149 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 XRCC5P13010 732 aaKnown RBP14.91□□□□□ -0.02
CDT1-203ENST00000569140 LIFRP42702 1097 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 TRIM32Q13049 653 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 MTFR1Q15390 333 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 NSMFQ6X4W1 530 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 Q6ZUG5 572 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
CDT1-203ENST00000569140 ABRAQ8N0Z2 381 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 KCNB2Q92953 911 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 ZNF236Q9UL36 1845 aa14.91□□□□□ -0.02
CDT1-203ENST00000569140 KLF18A0A0U1RQI7 1052 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
CDT1-203ENST00000569140 COBLO75128 1261 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 CCL5P13501 91 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 RPS6KB1P23443 525 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 EXOSC10Q01780 885 aaKnown RBP14.9□□□□□ -0.02
CDT1-203ENST00000569140 TROAPQ12815 778 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 MUM1L1Q5H9M0 696 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 MFSD14CQ5VZR4 134 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 USP6NLQ92738 828 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 RNF208Q9H0X6 261 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
CDT1-203ENST00000569140 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
CDT1-203ENST00000569140 QRICH1Q2TAL8 776 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 IFFO2Q5TF58 517 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 BRF1Q92994 677 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
CDT1-203ENST00000569140 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 FLRT1Q9NZU1 646 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 PNMA2Q9UL42 364 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
CDT1-203ENST00000569140 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 GOLGA8AA7E2F4 631 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 GOLGA8BA8MQT2 603 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 ZBTB43O43298 467 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 SEC24BO95487 1268 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 HOXC6P09630 235 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 CNGA1P29973 690 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 CYP2C19P33261 490 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 APOBRQ0VD83 1088 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 APOA5Q6Q788 366 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 RUFY3Q7L099 469 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 MAML3Q96JK9 1138 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 PIGSQ96S52 555 aa14.88□□□□□ -0.03
CDT1-203ENST00000569140 HMX1Q9NP08 348 aaPredicted RBP14.88□□□□□ -0.03
CDT1-203ENST00000569140 A1CFQ9NQ94 594 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 388.1 ms