RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 CAP2P40123 477 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 NASPP49321 788 aaPredicted RBP8.6□□□□□ -1.03
KARS-210ENST00000568682 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
KARS-210ENST00000568682 TMF1P82094 1093 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 DEFB132Q7Z7B7 95 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 SMYD4Q8IYR2 804 aaPredicted RBP8.6□□□□□ -1.03
KARS-210ENST00000568682 ISL2Q96A47 359 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 ARMC5Q96C12 935 aa8.6□□□□□ -1.03
KARS-210ENST00000568682 BRD4O60885 1362 aaPredicted RBP8.6□□□□□ -1.03
KARS-210ENST00000568682 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
KARS-210ENST00000568682 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 PGRP06401 933 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 BMP3P12645 472 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 HCLS1P14317 486 aaPredicted RBP8.59□□□□□ -1.03
KARS-210ENST00000568682 PLCG1P19174 1290 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 DNAJA1P31689 397 aaKnown RBP8.59□□□□□ -1.03
KARS-210ENST00000568682 CLCQ05315 142 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 SGO2Q562F6 1265 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 GK5Q6ZS86 529 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 HID1Q8IV36 788 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 SEMA6CQ9H3T2 930 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 PRKAG2Q9UGJ0 569 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 PCOLCE2Q9UKZ9 415 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 CORINQ9Y5Q5 1042 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 RGPD1P0DJD0 1748 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 AATKQ6ZMQ8 1374 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 ANKRD36BQ8N2N9 1353 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
KARS-210ENST00000568682 CRB1P82279 1406 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 MEIS3P2A8K0S8 358 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 MAP4P27816 1152 aaKnown RBP8.58□□□□□ -1.04
KARS-210ENST00000568682 MAP7Q14244 749 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
KARS-210ENST00000568682 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
KARS-210ENST00000568682 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 CDC37L1Q7L3B6 337 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 MCF2L2Q86YR7 1114 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 RBBP8NLQ8NC74 664 aaPredicted RBP8.58□□□□□ -1.04
KARS-210ENST00000568682 LTV1Q96GA3 475 aaPredicted RBP8.58□□□□□ -1.04
KARS-210ENST00000568682 FERD3LQ96RJ6 166 aa8.58□□□□□ -1.04
KARS-210ENST00000568682 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.044e-6■■■□□ 16.3
KARS-210ENST00000568682 RNGTTO60942 597 aaKnown RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 RAB6AP20340 208 aa8.57□□□□□ -1.04
KARS-210ENST00000568682 SLC6A19Q695T7 634 aa8.57□□□□□ -1.04
KARS-210ENST00000568682 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
KARS-210ENST00000568682 MCATQ8IVS2 390 aaKnown RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
KARS-210ENST00000568682 ACSF2Q96CM8 615 aaPredicted RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 SRRTQ9BXP5 876 aaKnown RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
KARS-210ENST00000568682 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
KARS-210ENST00000568682 WDR17Q8IZU2 1322 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 FAM208AQ9UK61 1670 aaKnown RBP8.56□□□□□ -1.04
KARS-210ENST00000568682 SRCAPQ6ZRS2 3230 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 FYB1O15117 783 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
KARS-210ENST00000568682 TCP11L2Q8N4U5 519 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 KCNH5Q8NCM2 988 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 OR6P1Q8NGX9 317 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 TP53INP1Q96A56 240 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 FBRSQ9HAH7 460 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 GMIPQ9P107 970 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 TJP2Q9UDY2 1190 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
KARS-210ENST00000568682 SHANK3Q9BYB0 1731 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 FAM95CA0A1B0GW59 222 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 NFICP08651 508 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 GIPRP48546 466 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 SLBPQ14493 270 aaKnown RBP eCLIP8.55□□□□□ -1.04
KARS-210ENST00000568682 SEZ6L2Q6UXD5 910 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 SLFN12Q8IYM2 578 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 SHDQ96IW2 340 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 TMEM87BQ96K49 555 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 SSU72Q9NP77 194 aaKnown RBP8.55□□□□□ -1.04
KARS-210ENST00000568682 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
KARS-210ENST00000568682 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 NINLQ9Y2I6 1382 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 LRIG2O94898 1065 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 CST3P01034 146 aaPredicted RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
KARS-210ENST00000568682 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 YARSP54577 528 aaKnown RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 EIF6P56537 245 aaKnown RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
KARS-210ENST00000568682 PAOXQ6QHF9 649 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
KARS-210ENST00000568682 BEND4Q6ZU67 534 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms