RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 PPP1R9AQ9ULJ8 1098 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 ADGRA2Q96PE1 1338 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 BAZ2BQ9UIF8 2168 aaKnown RBP13.35□□□□□ -0.27
KARS-207ENST00000566560 CA12O43570 354 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
KARS-207ENST00000566560 SLC16A2P36021 539 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 EVCP57679 992 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 COG2Q14746 738 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 SYDE2Q5VT97 1194 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 P2RX7Q99572 595 aaKnown RBP13.35□□□□□ -0.27
KARS-207ENST00000566560 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
KARS-207ENST00000566560 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 SAGE1Q9NXZ1 904 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
KARS-207ENST00000566560 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
KARS-207ENST00000566560 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 PLA2G6O60733 806 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 TRPA1O75762 1119 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 PDIA3P30101 505 aaKnown RBP13.34□□□□□ -0.27
KARS-207ENST00000566560 GNAQP50148 359 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 BTNL9Q6UXG8 535 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 LBX2Q6XYB7 198 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
KARS-207ENST00000566560 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 TPCN1Q9ULQ1 816 aa13.34□□□□□ -0.27
KARS-207ENST00000566560 RBBP6Q7Z6E9 1792 aaKnown RBP13.34□□□□□ -0.27
KARS-207ENST00000566560 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 TLR2O60603 784 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 PLEKHA8P1O95397 391 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 LARGE1O95461 756 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
KARS-207ENST00000566560 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
KARS-207ENST00000566560 STK3Q13188 491 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 PLPP6Q8IY26 295 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 MB21D1Q8N884 522 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 JMYQ8N9B5 988 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
KARS-207ENST00000566560 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 CFHR5Q9BXR6 569 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
KARS-207ENST00000566560 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 CPA4Q9UI42 421 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.28
KARS-207ENST00000566560 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
KARS-207ENST00000566560 VWA5AO00534 786 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
KARS-207ENST00000566560 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 CDC27P30260 824 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
KARS-207ENST00000566560 FAM110CQ1W6H9 321 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 ADGRF4Q8IZF3 695 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 CMTR1Q8N1G2 835 aaKnown RBP13.32□□□□□ -0.28
KARS-207ENST00000566560 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
KARS-207ENST00000566560 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
KARS-207ENST00000566560 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
KARS-207ENST00000566560 MGAMO43451 1857 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 CPLX1O14810 134 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 PFKFB2O60825 505 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 ZBED4O75132 1171 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 FDX1P10109 184 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 MCM2P49736 904 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 SNAP25P60880 206 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 SCRN1Q12765 414 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 PLS1Q14651 629 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 ME3Q16798 604 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 SLC35G1Q2M3R5 365 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 CCDC174Q6PII3 467 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 REPS2Q8NFH8 660 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 GTF3C6Q969F1 213 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 R3HDMLQ9H3Y0 253 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 TXNRD2Q9NNW7 524 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
KARS-207ENST00000566560 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 ADAMTS5Q9UNA0 930 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 PLXNB2O15031 1838 aa13.31□□□□□ -0.28
KARS-207ENST00000566560 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
KARS-207ENST00000566560 CYTH3O43739 400 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms