RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MOXD2PA6NHM9 499 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
CMTM3-212ENST00000566121 IGHDP01880 384 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
CMTM3-212ENST00000566121 SDSP20132 328 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 MCCP23508 829 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 RTP1P59025 263 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 CCSAPQ6IQ19 270 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-212ENST00000566121 CPXCR1Q8N123 301 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 FGD4Q96M96 766 aa17.93■□□□□ 0.46
CMTM3-212ENST00000566121 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-212ENST00000566121 A0A0C4DFX4 3053 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-212ENST00000566121 ADCYAP1R1P41586 468 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-212ENST00000566121 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 CCDC178Q5BJE1 867 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 AKNAD1Q5T1N1 836 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 ZNF589Q86UQ0 364 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-212ENST00000566121 UBE2OQ9C0C9 1292 aaKnown RBP17.92■□□□□ 0.46
CMTM3-212ENST00000566121 PRKAG2Q9UGJ0 569 aa17.92■□□□□ 0.46
CMTM3-212ENST00000566121 ASB14A6NK59 587 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 SYN1P17600 705 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 DGKHQ86XP1 1220 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 KATNBL1Q9H079 304 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 UPF3AQ9H1J1 476 aaKnown RBP17.91■□□□□ 0.46
CMTM3-212ENST00000566121 RANBP17Q9H2T7 1088 aaKnown RBP17.91■□□□□ 0.46
CMTM3-212ENST00000566121 INCENPQ9NQS7 918 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-212ENST00000566121 PRR12Q9ULL5 1215 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 ELP1O95163 1332 aa17.91■□□□□ 0.46
CMTM3-212ENST00000566121 COL6A3P12111 3177 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-212ENST00000566121 ICAM1P05362 532 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 GJA9P57773 515 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 FAM109BQ6ICB4 259 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-212ENST00000566121 MFSD6Q6ZSS7 791 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 MORC4Q8TE76 937 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 LBHD1Q9BQE6 289 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-212ENST00000566121 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 DSCC1Q9BVC3 393 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 SEZ6LQ9BYH1 1024 aa17.9■□□□□ 0.46
CMTM3-212ENST00000566121 A1CFQ9NQ94 594 aaKnown RBP17.9■□□□□ 0.46
CMTM3-212ENST00000566121 NMT2O60551 498 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-212ENST00000566121 ANO1Q5XXA6 986 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
CMTM3-212ENST00000566121 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 AGBL1Q96MI9 1066 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 Q9Y3F1 56 aa17.89■□□□□ 0.45
CMTM3-212ENST00000566121 KIAA0355O15063 1070 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 KCTD1Q719H9 257 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 ESR2Q92731 530 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 RILPL2Q969X0 211 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 SPC25Q9HBM1 224 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 CYP39A1Q9NYL5 469 aa17.88■□□□□ 0.45
CMTM3-212ENST00000566121 A0A1W2PQ45 241 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-212ENST00000566121 A0A1W2PQY0 241 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 ZNF213O14771 459 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 PGK1P00558 417 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 PDHBP11177 359 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 CDK7P50613 346 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 ACLYP53396 1101 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 TLE2Q04725 743 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 GPATCH4Q5T3I0 446 aaKnown RBP17.87■□□□□ 0.45
CMTM3-212ENST00000566121 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 CCDC144CPQ8IYA2 1237 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 RGS22Q8NE09 1264 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 ATP11BQ9Y2G3 1177 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 WDR19Q8NEZ3 1342 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 SYNRGQ9UMZ2 1314 aa17.87■□□□□ 0.45
CMTM3-212ENST00000566121 SOWAHBA6NEL2 793 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 CNTN2Q02246 1040 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 ZNF543Q08ER8 600 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 IKQ13123 557 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-212ENST00000566121 CCDC144BQ3MJ40 725 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 TRIM60Q495X7 471 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 IQSEC1Q6DN90 963 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 MROH7Q68CQ1 1323 aa17.86■□□□□ 0.45
CMTM3-212ENST00000566121 CABYRO75952 493 aa17.85■□□□□ 0.45
CMTM3-212ENST00000566121 MDM2Q00987 491 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-212ENST00000566121 KCNA10Q16322 511 aa17.85■□□□□ 0.45
CMTM3-212ENST00000566121 DIAPH3Q9NSV4 1193 aa17.85■□□□□ 0.45
CMTM3-212ENST00000566121 ADD3Q9UEY8 706 aaKnown RBP17.85■□□□□ 0.45
CMTM3-212ENST00000566121 ZHX1Q9UKY1 873 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-212ENST00000566121 GNEQ9Y223 722 aaKnown RBP17.85■□□□□ 0.45
CMTM3-212ENST00000566121 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms