RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CCDC174Q6PII3 467 aa24.84■■□□□ 1.57
HERC2-204ENST00000563945 NEDD1Q8NHV4 660 aa24.84■■□□□ 1.57
HERC2-204ENST00000563945 MYLIPQ8WY64 445 aa24.84■■□□□ 1.57
HERC2-204ENST00000563945 COL25A1Q9BXS0 654 aaPredicted RBP24.84■■□□□ 1.57
HERC2-204ENST00000563945 HOMER2Q9NSB8 354 aa24.84■■□□□ 1.57
HERC2-204ENST00000563945 TMEM232C9JQI7 657 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 FOSL2P15408 326 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 TFAP4Q01664 338 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 CCDC144BQ3MJ40 725 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 GNASQ5JWF2 1037 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 NOL8Q76FK4 1167 aaKnown RBP24.83■■□□□ 1.57
HERC2-204ENST00000563945 FSD1Q9BTV5 496 aa24.83■■□□□ 1.57
HERC2-204ENST00000563945 TTC41PQ6P2S7 1318 aa24.83■■□□□ 1.56
HERC2-204ENST00000563945 GREB1LQ9C091 1923 aaPredicted RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 TMEM265A0A087WTH1 108 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 TLR3O15455 904 aaKnown RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 TIMP1P01033 207 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 ASGR1P07306 291 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 STAT2P52630 851 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 EPHB4P54760 987 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.82■■□□□ 1.56
HERC2-204ENST00000563945 ARMCX2Q7L311 632 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 FAM160B2Q86V87 743 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 TTYH1Q9H313 450 aaPredicted RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 ACAD9Q9H845 621 aa24.82■■□□□ 1.56
HERC2-204ENST00000563945 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
HERC2-204ENST00000563945 MYH4Q9Y623 1939 aa24.81■■□□□ 1.56
HERC2-204ENST00000563945 CST5P28325 142 aaPredicted RBP24.81■■□□□ 1.56
HERC2-204ENST00000563945 SLC1A4P43007 532 aa24.81■■□□□ 1.56
HERC2-204ENST00000563945 A0A0U1RQG5 324 aaPredicted RBP24.8■■□□□ 1.56
HERC2-204ENST00000563945 GJA9P57773 515 aa24.8■■□□□ 1.56
HERC2-204ENST00000563945 PPIGQ13427 754 aaKnown RBP eCLIP24.8■■□□□ 1.56
HERC2-204ENST00000563945 CCSAPQ6IQ19 270 aaPredicted RBP24.8■■□□□ 1.56
HERC2-204ENST00000563945 CCDC144CPQ8IYA2 1237 aa24.8■■□□□ 1.56
HERC2-204ENST00000563945 STAG1Q8WVM7 1258 aa24.8■■□□□ 1.56
HERC2-204ENST00000563945 CHMP4CQ96CF2 233 aa24.8■■□□□ 1.56
HERC2-204ENST00000563945 MYADML2A6NDP7 307 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 ASB14A6NK59 587 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 PPARAQ07869 468 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 TKFCQ3LXA3 575 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 MFSD5Q6N075 450 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 TMEM199Q8N511 208 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 SEC62Q99442 399 aaKnown RBP24.79■■□□□ 1.56
HERC2-204ENST00000563945 STX8Q9UNK0 236 aa24.79■■□□□ 1.56
HERC2-204ENST00000563945 TSPY2A6NKD2 308 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 ARVCFO00192 962 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 MCCP23508 829 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 CNTN2Q02246 1040 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 TNFAIP2Q03169 654 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 GMCL1Q96IK5 515 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 UPF3AQ9H1J1 476 aaKnown RBP24.78■■□□□ 1.56
HERC2-204ENST00000563945 RNF146Q9NTX7 359 aa24.78■■□□□ 1.56
HERC2-204ENST00000563945 ALAS1P13196 640 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 CDK7P50613 346 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 AGBL1Q96MI9 1066 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 TRERF1Q96PN7 1200 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 AP5M1Q9H0R1 490 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 TBX21Q9UL17 535 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 PLIN4Q96Q06 1357 aa24.77■■□□□ 1.56
HERC2-204ENST00000563945 DNAJB2P25686 324 aa24.76■■□□□ 1.55
HERC2-204ENST00000563945 IRX5P78411 483 aaPredicted RBP24.76■■□□□ 1.55
HERC2-204ENST00000563945 ZMYM1Q5SVZ6 1142 aa24.76■■□□□ 1.55
HERC2-204ENST00000563945 CCDC129Q6ZRS4 1044 aa24.76■■□□□ 1.55
HERC2-204ENST00000563945 FGD4Q96M96 766 aa24.76■■□□□ 1.55
HERC2-204ENST00000563945 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.76■■□□□ 1.55
HERC2-204ENST00000563945 ZEB2O60315 1214 aa24.75■■□□□ 1.55
HERC2-204ENST00000563945 RCSD1Q6JBY9 416 aa24.75■■□□□ 1.55
HERC2-204ENST00000563945 FAM133AQ8N9E0 248 aa24.75■■□□□ 1.55
HERC2-204ENST00000563945 PPP1R12CQ9BZL4 782 aa24.75■■□□□ 1.55
HERC2-204ENST00000563945 A1CFQ9NQ94 594 aaKnown RBP24.75■■□□□ 1.55
HERC2-204ENST00000563945 CABYRO75952 493 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 BEX3Q00994 111 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 KCTD1Q719H9 257 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 PI4K2BQ8TCG2 481 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 TIFAQ96CG3 184 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 MTMR7Q9Y216 660 aa24.74■■□□□ 1.55
HERC2-204ENST00000563945 LAMA2P24043 3122 aaKnown RBP24.74■■□□□ 1.55
HERC2-204ENST00000563945 ADCY6O43306 1168 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 RANBP6O60518 1105 aaKnown RBP24.73■■□□□ 1.55
HERC2-204ENST00000563945 PLA2G6O60733 806 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 MX1P20591 662 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 CTDSPL2Q05D32 466 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 ZNF576Q9H609 170 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 MCM3APO60318 1980 aa24.73■■□□□ 1.55
HERC2-204ENST00000563945 CSF2RAP15509 400 aa24.72■■□□□ 1.55
HERC2-204ENST00000563945 CCDC96Q2M329 555 aa24.72■■□□□ 1.55
HERC2-204ENST00000563945 TMEM240Q5SV17 173 aa24.72■■□□□ 1.55
HERC2-204ENST00000563945 PSRC1Q6PGN9 363 aaPredicted RBP24.72■■□□□ 1.55
HERC2-204ENST00000563945 FAM126BQ8IXS8 530 aa24.72■■□□□ 1.55
HERC2-204ENST00000563945 SYMPKQ92797 1274 aaKnown RBP24.72■■□□□ 1.55
HERC2-204ENST00000563945 MTIF3Q9H2K0 278 aaKnown RBP24.72■■□□□ 1.55
HERC2-204ENST00000563945 TOMM22Q9NS69 142 aa24.72■■□□□ 1.55
HERC2-204ENST00000563945 ZNF536O15090 1300 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.71■■□□□ 1.55
HERC2-204ENST00000563945 SOWAHBA6NEL2 793 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 DYNC1LI2O43237 492 aaPredicted RBP24.71■■□□□ 1.55
HERC2-204ENST00000563945 GRIN2CQ14957 1233 aa24.71■■□□□ 1.55
HERC2-204ENST00000563945 IQSEC1Q6DN90 963 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms