RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 MAP3K21Q5TCX8 1036 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 RAVER2Q9HCJ3 691 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 RIPK3Q9Y572 518 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 WDR19Q8NEZ3 1342 aa18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 ZNFX1Q9P2E3 1918 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-219ENST00000560871 COPB2P35606 906 aa18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 TROAPQ12815 778 aa18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 NCAPG2Q86XI2 1143 aa18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-219ENST00000560871 TFRCP02786 760 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 LIFRP42702 1097 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 GRM4Q14833 912 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 CCL14Q16627 93 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 ABRAQ8N0Z2 381 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 APBA2Q99767 749 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 IVNS1ABPQ9Y6Y0 642 aa18.11■□□□□ 0.49
RABGGTA-219ENST00000560871 FARP2O94887 1054 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 HOXC6P09630 235 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 SNAP25P60880 206 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 CACNB2Q08289 660 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 C8orf34Q49A92 452 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 DHX32Q7L7V1 743 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 STAG2Q8N3U4 1231 aa18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 JAKMIP1Q96N16 626 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-219ENST00000560871 PALM3A6NDB9 673 aaPredicted RBP18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 STRNO43815 780 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 DDAH1O94760 285 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 HMGB1P09429 215 aaKnown RBP18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 ADORA2AP29274 412 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 AGBL1Q96MI9 1066 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 TCEANC2Q96MN5 208 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 UBA5Q9GZZ9 404 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 CTDP1Q9Y5B0 961 aaPredicted RBP18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
RABGGTA-219ENST00000560871 MKI67P46013 3256 aaKnown RBP18.08■□□□□ 0.49
RABGGTA-219ENST00000560871 ICAM1P05362 532 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 CPA1P15085 419 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 TAL1P17542 331 aaPredicted RBP18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 CATIPQ7Z7H3 387 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 ANKLE1Q8NAG6 615 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 NPLOC4Q8TAT6 608 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 MAP3K14Q99558 947 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 ALPK3Q96L96 1907 aa18.08■□□□□ 0.48
RABGGTA-219ENST00000560871 COBLO75128 1261 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 SEC24BO95487 1268 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 IGHA2P01877 340 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 FCER1AP12319 257 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 ADGRF4Q8IZF3 695 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 CHST13Q8NET6 341 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 MMP19Q99542 508 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 MYL10Q9BUA6 226 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
RABGGTA-219ENST00000560871 PLXNA1Q9UIW2 1896 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 KLRF2D3W0D1 207 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 TKFCQ3LXA3 575 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 DPF3Q92784 378 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 MTMR8Q96EF0 704 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 ACAD9Q9H845 621 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 RNF146Q9NTX7 359 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 OGDHLQ9ULD0 1010 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
RABGGTA-219ENST00000560871 DNAJC25-GNG10A0A024R161 153 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 CYTH3O43739 400 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 EIF5BO60841 1220 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 ALAS1P13196 640 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 CASTP20810 708 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 PSMA5P28066 241 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 CCND3P30281 292 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 MNX1P50219 401 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 KCTD2Q14681 263 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
RABGGTA-219ENST00000560871 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms