RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 TMEM232C9JQI7 657 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 CST5P28325 142 aaPredicted RBP28.42■■■□□ 2.14
PBX1-217ENST00000559578 STAT2P52630 851 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 FAAP100Q0VG06 881 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 PPP4R3BQ5MIZ7 849 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 ZMYM1Q5SVZ6 1142 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 CCSAPQ6IQ19 270 aaPredicted RBP28.42■■■□□ 2.14
PBX1-217ENST00000559578 PCSK9Q8NBP7 692 aaKnown RBP28.42■■■□□ 2.14
PBX1-217ENST00000559578 CDX2Q99626 313 aaPredicted RBP28.42■■■□□ 2.14
PBX1-217ENST00000559578 HOMER2Q9NSB8 354 aa28.42■■■□□ 2.14
PBX1-217ENST00000559578 LAMA2P24043 3122 aaKnown RBP28.42■■■□□ 2.14
PBX1-217ENST00000559578 C6orf222P0C671 652 aaPredicted RBP28.41■■■□□ 2.14
PBX1-217ENST00000559578 ARMCX2Q7L311 632 aa28.41■■■□□ 2.14
PBX1-217ENST00000559578 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.41■■■□□ 2.14
PBX1-217ENST00000559578 CHURC1Q8WUH1 139 aa28.41■■■□□ 2.14
PBX1-217ENST00000559578 MROH7Q68CQ1 1323 aa28.41■■■□□ 2.14
PBX1-217ENST00000559578 SLC1A4P43007 532 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 IKQ13123 557 aaPredicted RBP28.4■■■□□ 2.14
PBX1-217ENST00000559578 CCDC144BQ3MJ40 725 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 FAM160B2Q86V87 743 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 FGD4Q96M96 766 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 ACAD9Q9H845 621 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 ELP1O95163 1332 aa28.4■■■□□ 2.14
PBX1-217ENST00000559578 MYADML2A6NDP7 307 aa28.39■■■□□ 2.14
PBX1-217ENST00000559578 EPHB4P54760 987 aa28.39■■■□□ 2.14
PBX1-217ENST00000559578 CCDC144CPQ8IYA2 1237 aa28.39■■■□□ 2.14
PBX1-217ENST00000559578 OTUD7AQ8TE49 926 aaPredicted RBP28.39■■■□□ 2.14
PBX1-217ENST00000559578 GMCL1Q96IK5 515 aa28.39■■■□□ 2.14
PBX1-217ENST00000559578 PCDHB15Q9Y5E8 787 aa28.39■■■□□ 2.14
PBX1-217ENST00000559578 MX1P20591 662 aa28.38■■■□□ 2.13
PBX1-217ENST00000559578 GJA9P57773 515 aa28.38■■■□□ 2.13
PBX1-217ENST00000559578 STAG1Q8WVM7 1258 aa28.38■■■□□ 2.13
PBX1-217ENST00000559578 VTI1AQ96AJ9 217 aa28.38■■■□□ 2.13
PBX1-217ENST00000559578 UPF3AQ9H1J1 476 aaKnown RBP28.38■■■□□ 2.13
PBX1-217ENST00000559578 ASGR1P07306 291 aa28.37■■■□□ 2.13
PBX1-217ENST00000559578 GNASQ5JWF2 1037 aa28.37■■■□□ 2.13
PBX1-217ENST00000559578 STX8Q9UNK0 236 aa28.37■■■□□ 2.13
PBX1-217ENST00000559578 TSPY2A6NKD2 308 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 ADCY6O43306 1168 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 TIMP1P01033 207 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 MCCP23508 829 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 CNTN2Q02246 1040 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 TKFCQ3LXA3 575 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 FAM133AQ8N9E0 248 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 TTYH1Q9H313 450 aaPredicted RBP28.36■■■□□ 2.13
PBX1-217ENST00000559578 RNF146Q9NTX7 359 aa28.36■■■□□ 2.13
PBX1-217ENST00000559578 ZBTB47Q9UFB7 747 aaPredicted RBP28.36■■■□□ 2.13
PBX1-217ENST00000559578 TMEM265A0A087WTH1 108 aa28.35■■■□□ 2.13
PBX1-217ENST00000559578 A0A0U1RQG5 324 aaPredicted RBP28.35■■■□□ 2.13
PBX1-217ENST00000559578 IRX5P78411 483 aaPredicted RBP28.35■■■□□ 2.13
PBX1-217ENST00000559578 CHMP4CQ96CF2 233 aa28.35■■■□□ 2.13
PBX1-217ENST00000559578 AGBL1Q96MI9 1066 aa28.35■■■□□ 2.13
PBX1-217ENST00000559578 A1CFQ9NQ94 594 aaKnown RBP28.35■■■□□ 2.13
PBX1-217ENST00000559578 TBX21Q9UL17 535 aa28.35■■■□□ 2.13
PBX1-217ENST00000559578 ASB14A6NK59 587 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 PLA2G6O60733 806 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 CDK7P50613 346 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 MAFAQ8NHW3 353 aaPredicted RBP28.34■■■□□ 2.13
PBX1-217ENST00000559578 TRERF1Q96PN7 1200 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 KATNBL1Q9H079 304 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.34■■■□□ 2.13
PBX1-217ENST00000559578 ZNF536O15090 1300 aa28.34■■■□□ 2.13
PBX1-217ENST00000559578 CTDSPL2Q05D32 466 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 RCSD1Q6JBY9 416 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 MFSD5Q6N075 450 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 CCDC129Q6ZRS4 1044 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 KCTD1Q719H9 257 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 NOL8Q76FK4 1167 aaKnown RBP28.33■■■□□ 2.13
PBX1-217ENST00000559578 MYLIPQ8WY64 445 aa28.33■■■□□ 2.13
PBX1-217ENST00000559578 COL25A1Q9BXS0 654 aaPredicted RBP28.33■■■□□ 2.13
PBX1-217ENST00000559578 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.32■■■□□ 2.12
PBX1-217ENST00000559578 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.32■■■□□ 2.12
PBX1-217ENST00000559578 ARVCFO00192 962 aa28.32■■■□□ 2.12
PBX1-217ENST00000559578 ALAS1P13196 640 aa28.32■■■□□ 2.12
PBX1-217ENST00000559578 TNFAIP2Q03169 654 aa28.32■■■□□ 2.12
PBX1-217ENST00000559578 CCDC174Q6PII3 467 aa28.32■■■□□ 2.12
PBX1-217ENST00000559578 IL17RBQ9NRM6 502 aa28.32■■■□□ 2.12
PBX1-217ENST00000559578 TLR3O15455 904 aaKnown RBP28.31■■■□□ 2.12
PBX1-217ENST00000559578 NKX3-2P78367 333 aa28.31■■■□□ 2.12
PBX1-217ENST00000559578 SOWAHBA6NEL2 793 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 FOXP2O15409 715 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 RANBP6O60518 1105 aaKnown RBP28.3■■■□□ 2.12
PBX1-217ENST00000559578 NMT2O60551 498 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 FOSL2P15408 326 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 PPIGQ13427 754 aaKnown RBP eCLIP28.3■■■□□ 2.12
PBX1-217ENST00000559578 EVI5LQ96CN4 794 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 INCENPQ9NQS7 918 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 PRR12Q9ULL5 1215 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 UNC80Q8N2C7 3258 aa28.3■■■□□ 2.12
PBX1-217ENST00000559578 CTAGE5O15320 804 aa28.29■■■□□ 2.12
PBX1-217ENST00000559578 BEX3Q00994 111 aa28.29■■■□□ 2.12
PBX1-217ENST00000559578 FAM126BQ8IXS8 530 aa28.29■■■□□ 2.12
PBX1-217ENST00000559578 TMEM199Q8N511 208 aa28.29■■■□□ 2.12
PBX1-217ENST00000559578 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.29■■■□□ 2.12
PBX1-217ENST00000559578 ANAPC4Q9UJX5 808 aa28.29■■■□□ 2.12
PBX1-217ENST00000559578 SALL3Q9BXA9 1300 aa28.28■■■□□ 2.12
PBX1-217ENST00000559578 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.28■■■□□ 2.12
PBX1-217ENST00000559578 SNAP25P60880 206 aa28.28■■■□□ 2.12
PBX1-217ENST00000559578 ANKRD45Q5TZF3 282 aa28.28■■■□□ 2.12
PBX1-217ENST00000559578 MTMR7Q9Y216 660 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms