RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	TECTA	O75443	2155 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	C19orf67	A6NJJ6	358 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702		H3BQ06	376 aa	Predicted RBP	11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	VWA5A	O00534	786 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	WDR46	O15213	610 aa	Known RBP	11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	IGSF3	O75054	1194 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	BMP8A	Q7Z5Y6	402 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	MRPL50	Q8N5N7	158 aa	Known RBP	11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	MAGEB6	Q8N7X4	407 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZBED2	Q9BTP6	218 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	ARHGEF10L	Q9HCE6	1279 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	SNRK	Q9NRH2	765 aa		11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZNF214	Q9UL59	606 aa	Predicted RBP	11.46	□□□□□ -0.57
PABPN1-208	ENST00000557702	FOCAD	Q5VW36	1801 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	DNAJC25-GNG10	A0A024R161	153 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	LCHN	A4D1U4	455 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	POLR3D	P05423	398 aa	Predicted RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	CYP2C9	P11712	490 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	CYP7A1	P22680	504 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	IRS1	P35568	1242 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	KCNJ6	P48051	423 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	PLCD1	P51178	756 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	TNFAIP2	Q03169	654 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	FSCN1	Q16658	493 aa	Known RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	TMEM179	Q6ZVK1	233 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	SUGP1	Q8IWZ8	645 aa	Known RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	PBXIP1	Q96AQ6	731 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	TGS1	Q96RS0	853 aa	Known RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	SH2D4A	Q9H788	454 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	VCPKMT	Q9H867	229 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	FAM86C1	Q9NVL1	165 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	MUTYH	Q9UIF7	546 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	MTUS1	Q9ULD2	1270 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	TMX2	Q9Y320	296 aa		11.45	□□□□□ -0.58
PABPN1-208	ENST00000557702	FAM186A	A6NE01	2351 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	BAIAP3	O94812	1187 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	ERVK-21	P61565	698 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	PSMC6	P62333	389 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	ARMCX2	Q7L311	632 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	TLK2	Q86UE8	772 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	EDA	Q92838	391 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	ATOH1	Q92858	354 aa	Predicted RBP	11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	POP1	Q99575	1024 aa	Known RBP	11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	AP5M1	Q9H0R1	490 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	TRMT13	Q9NUP7	481 aa	Known RBP	11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	FBXO28	Q9NVF7	368 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	PPP1R9A	Q9ULJ8	1098 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	TRIO	O75962	3097 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	MYH1	P12882	1939 aa		11.44	□□□□□ -0.58
PABPN1-208	ENST00000557702	TNKS	O95271	1327 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	TMEM221	A6NGB7	291 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702		M0R296	226 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	CYP2E1	P05181	493 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	ID4	P47928	161 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	GABPA	Q06546	454 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	EP400NL	Q6ZTU2	488 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	MIGA1	Q8NAN2	632 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	RETREG2	Q8NC44	543 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	REPS2	Q8NFH8	660 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	TEX13B	Q9BXU2	312 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	CTNNA3	Q9UI47	895 aa		11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	GNE	Q9Y223	722 aa	Known RBP	11.43	□□□□□ -0.58
PABPN1-208	ENST00000557702	ASTN1	O14525	1302 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	DYNC1LI2	O43237	492 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	IQCF3	P0C7M6	154 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	ICA1	Q05084	483 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	PTPRO	Q16827	1216 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	CCDC158	Q5M9N0	1113 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	TTC39A	Q5SRH9	613 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	SNRNP48	Q6IEG0	339 aa	Known RBP	11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	TRIM67	Q6ZTA4	783 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	SIAH1	Q8IUQ4	282 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	CCDC144CP	Q8IYA2	1237 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	CRBN	Q96SW2	442 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	RAD9A	Q99638	391 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	KATNBL1	Q9H079	304 aa		11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	COL4A4	P53420	1690 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPN1-208	ENST00000557702	DCHS1	Q96JQ0	3298 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	LINC01553	A4QN01	128 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	PITPNM1	O00562	1244 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	SLC4A3	P48751	1232 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	RNF135	Q8IUD6	432 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	ANKRD35	Q8N283	1001 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	PABPC5	Q96DU9	382 aa	Known RBP	11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	MRPL38	Q96DV4	380 aa	Known RBP	11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	RIPK3	Q9Y572	518 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	SCN5A	Q14524	2016 aa		11.41	□□□□□ -0.58
PABPN1-208	ENST00000557702	COL11A1	P12107	1806 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	MCM3AP	O60318	1980 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	SRGAP3	O43295	1099 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	WDR5	P61964	334 aa	Known RBP	11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	TIGD5	Q53EQ6	642 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	CLEC10A	Q8IUN9	316 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	FBXL6	Q8N531	539 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	FBXO22	Q8NEZ5	403 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms