RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PHF24Q9UPV7 400 aa16.76■□□□□ 0.27
SNX6-210ENST00000557341 SYNRGQ9UMZ2 1314 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 PGK1P00558 417 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 FGAP02671 866 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 FGRP09769 529 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
SNX6-210ENST00000557341 C1orf53Q5VUE5 145 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 KCTD1Q719H9 257 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
SNX6-210ENST00000557341 CHD1LQ86WJ1 897 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 LENG1Q96BZ8 264 aaPredicted RBP16.75■□□□□ 0.27
SNX6-210ENST00000557341 CHMP4CQ96CF2 233 aa16.75■□□□□ 0.27
SNX6-210ENST00000557341 ADAMTS4O75173 837 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 SNAI1O95863 264 aaPredicted RBP16.74■□□□□ 0.27
SNX6-210ENST00000557341 NOVP48745 357 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
SNX6-210ENST00000557341 TKFCQ3LXA3 575 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 RRP12Q5JTH9 1297 aaKnown RBP16.74■□□□□ 0.27
SNX6-210ENST00000557341 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
SNX6-210ENST00000557341 RNF146Q9NTX7 359 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
SNX6-210ENST00000557341 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
SNX6-210ENST00000557341 ZNF536O15090 1300 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 A0A1W2PQ45 241 aaPredicted RBP16.73■□□□□ 0.27
SNX6-210ENST00000557341 A0A1W2PQY0 241 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 NUCB1Q02818 461 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 ARMCX2Q7L311 632 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 FGD4Q96M96 766 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 AGBL1Q96MI9 1066 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 ABHD16BQ9H3Z7 469 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 OSBPL3Q9H4L5 887 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 A1CFQ9NQ94 594 aaKnown RBP16.73■□□□□ 0.27
SNX6-210ENST00000557341 PRR12Q9ULL5 1215 aa16.73■□□□□ 0.27
SNX6-210ENST00000557341 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
SNX6-210ENST00000557341 HAND2P61296 217 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 CCDC174Q6PII3 467 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 PLEKHM2Q8IWE5 1019 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 EXOC6Q8TAG9 804 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
SNX6-210ENST00000557341 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
SNX6-210ENST00000557341 MOXD2PA6NHM9 499 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 DUSP11O75319 330 aaKnown RBP16.71■□□□□ 0.27
SNX6-210ENST00000557341 IGHDP01880 384 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
SNX6-210ENST00000557341 ALAS1P13196 640 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 SDSP20132 328 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 CCDC144CPQ8IYA2 1237 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 FAM133AQ8N9E0 248 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 TRERF1Q96PN7 1200 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 DIAPH3Q9NSV4 1193 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.27
SNX6-210ENST00000557341 CST5P28325 142 aaPredicted RBP16.7■□□□□ 0.26
SNX6-210ENST00000557341 ACLYP53396 1101 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 TLE2Q04725 743 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 TMEM47Q9BQJ4 181 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 RANBP17Q9H2T7 1088 aaKnown RBP16.7■□□□□ 0.26
SNX6-210ENST00000557341 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
SNX6-210ENST00000557341 SPC25Q9HBM1 224 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 STARD7Q9NQZ5 370 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
SNX6-210ENST00000557341 HIP1O00291 1037 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 ADCY6O43306 1168 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 PQBP1O60828 265 aaKnown RBP16.69■□□□□ 0.26
SNX6-210ENST00000557341 ICAM1P05362 532 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 CLTBP09497 229 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
SNX6-210ENST00000557341 SNAP25P60880 206 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 TBC1D10CQ8IV04 446 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 DEFB123Q8N688 67 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 KLHDC9Q8NEP7 349 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
SNX6-210ENST00000557341 FRMPD2Q68DX3 1309 aaPredicted RBP16.69■□□□□ 0.26
SNX6-210ENST00000557341 ASB14A6NK59 587 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 PDHBP11177 359 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 NT5C2P49902 561 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 KCNA10Q16322 511 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 MUM1L1Q5H9M0 696 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 SYDE2Q5VT97 1194 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
SNX6-210ENST00000557341 BTNL9Q6UXG8 535 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 SH3RF1Q7Z6J0 888 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 PCSK9Q8NBP7 692 aaKnown RBP16.68■□□□□ 0.26
SNX6-210ENST00000557341 ESR2Q92731 530 aa16.68■□□□□ 0.26
SNX6-210ENST00000557341 BADQ92934 168 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms