RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 NOVP48745 357 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 RTP1P59025 263 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 NMIQ13287 307 aaPredicted RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 PWP2Q15269 919 aaKnown RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 IMMTQ16891 758 aaKnown RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 CCDC96Q2M329 555 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 LRIT3Q3SXY7 679 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 GPATCH4Q5T3I0 446 aaKnown RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 VPS53Q5VIR6 699 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 CWC27Q6UX04 472 aaKnown RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 DGKHQ86XP1 1220 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 EXOC6Q8TAG9 804 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 SEZ6LQ9BYH1 1024 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 KRT23Q9C075 422 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 MAF1Q9H063 256 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 PRR12Q9ULL5 1215 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 PHF24Q9UPV7 400 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 ATP11BQ9Y2G3 1177 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
FOXN3-205ENST00000553904 PDE4DIPQ5VU43 2346 aa7.67□□□□□ -1.18
FOXN3-205ENST00000553904 A0A0D9SFI3 127 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 SNAI1O95863 264 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 PGK1P00558 417 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 ICAM1P05362 532 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 MDM2Q00987 491 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 TRDNQ13061 729 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 IQSEC1Q6DN90 963 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 BTNL9Q6UXG8 535 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 NOL8Q76FK4 1167 aaKnown RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 FERMT2Q96AC1 680 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 GLT1D1Q96MS3 346 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 TMEM47Q9BQJ4 181 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 DSCC1Q9BVC3 393 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 CNNM2Q9H8M5 875 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 INCENPQ9NQS7 918 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 STARD7Q9NQZ5 370 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 HOMER2Q9NSB8 354 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 RNF146Q9NTX7 359 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 ZHX1Q9UKY1 873 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 CCPG1Q9ULG6 757 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 MTMR7Q9Y216 660 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 ELP1O95163 1332 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 MROH7Q68CQ1 1323 aa7.66□□□□□ -1.18
FOXN3-205ENST00000553904 DDX60LQ5H9U9 1706 aaKnown RBP7.66□□□□□ -1.18
FOXN3-205ENST00000553904 FOXP2O15409 715 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 NMT2O60551 498 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 CABYRO75952 493 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 C6orf222P0C671 652 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-205ENST00000553904 RAG1P15918 1043 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-205ENST00000553904 ACLYP53396 1101 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 HAND2P61296 217 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TNFAIP2Q03169 654 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TRAF1Q13077 416 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 SNX17Q15036 470 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 KCNA10Q16322 511 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 CCDC144BQ3MJ40 725 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 SYDE2Q5VT97 1194 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 CCDC174Q6PII3 467 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 ARMCX2Q7L311 632 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 CCDC144CPQ8IYA2 1237 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 AGBL1Q96MI9 1066 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TOX2Q96NM4 488 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 AP5M1Q9H0R1 490 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 KAT14Q9H8E8 782 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 GPCPD1Q9NPB8 672 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 PRDM5Q9NQX1 630 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TMEM39AQ9NV64 488 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 Q9Y3F1 56 aa7.65□□□□□ -1.18
FOXN3-205ENST00000553904 TNRC18O15417 2968 aaPredicted RBP7.65□□□□□ -1.19
FOXN3-205ENST00000553904 ZNF536O15090 1300 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 A0A1W2PQ45 241 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 A0A1W2PQY0 241 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 ERICH2A1L162 156 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 PTPDC1A2A3K4 754 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 CLTBP09497 229 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 PDHBP11177 359 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 CST5P28325 142 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 SLC16A2P36021 539 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 GJA9P57773 515 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 TLE2Q04725 743 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 TRIM60Q495X7 471 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 BRDTQ58F21 947 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 NSMFQ6X4W1 530 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 ANKRD33Q7Z3H0 272 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 ZNF589Q86UQ0 364 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 MCF2L2Q86YR7 1114 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 FAM133AQ8N9E0 248 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 RGS22Q8NE09 1264 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 KLHDC9Q8NEP7 349 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 DNERQ8NFT8 737 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 ANKS1AQ92625 1134 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 CHMP4CQ96CF2 233 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 ZSCAN10Q96SZ4 725 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-205ENST00000553904 UBAC1Q9BSL1 405 aa7.64□□□□□ -1.19
FOXN3-205ENST00000553904 RANBP17Q9H2T7 1088 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms